Gene Information

Name : LRI_2025 (LRI_2025)
Accession : YP_008111028.1
Strain :
Genome accession: NC_021504
Putative virulence/resistance : Resistance
Product : chloramphenicol acetyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6690 - 7340 bp
Length : 651 bp
Strand : +
Note : -

DNA sequence : 
ATGAACTTTAATAAAATTGATTTAGACAATTGGAAGAGAAAAGAGATATTTAATCATTATTTGAACCAACAAACGACTTT
TAGTATAACCACAGAAATTGATATTAGTGTTTTATACCGAAACATAAAACAAGAAGGATATAAATTTTACCCTGCATTTA
TTTTCTTAGTGACAAGGGTGATAAACTCAAATACAGCTTTTAGAACTGGTTACAATAGCGACGGAGAGTTAGGTTATTGG
GATAAGTTAGAGCCACTTTATACAATTTTTGATAGTGTATCTAAAACATTCTCTGGTATTTCGACTCCTGTAAAGAATGA
CTTCAAAGAGTTTTATGATTTATACCTTTCTGATGTAGAGAAATATAATGGTTCGGGGAAATTGTTTCCCAAAACACCTA
TACCCGAAAATGCTTTTTCTATTTCTATTATTCCATGGACTTCATTTACTGGGTTTAACTTAAATATCAATAATAATAGT
AATTATCTTCTACCCATTATTACAGCAGGAAAATTCATTAATAAAGGTAATTCAATATATTTACCGCTATCTTTACAGGT
ACATCATTCTGTTTGTGATGGTTATCATGCAGGATTGTTTATGAACTCTATTCAGGAATTGGCAGATAGGCCTAATGACT
GGCTTTTTTAA

Protein sequence : 
MNFNKIDLDNWKRKEIFNHYLNQQTTFSITTEIDISVLYRNIKQEGYKFYPAFIFLVTRVINSNTAFRTGYNSDGELGYW
DKLEPLYTIFDSVSKTFSGISTPVKNDFKEFYDLYLSDVEKYNGSGKLFPKTPIPENAFSISIIPWTSFTGFNLNINNNS
NYLLPIITAGKFINKGNSIYLPLSLQVHHSVCDGYHAGLFMNSIQELADRPNDWLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catA2 ACF06176.1 chloramphenicol acetyltransferase II Not tested Tn5036-like Protein 1e-36 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LRI_2025 YP_008111028.1 chloramphenicol acetyltransferase NC_010427.6155852.p0 Protein 3e-86 98
LRI_2025 YP_008111028.1 chloramphenicol acetyltransferase NC_010426.6155849.p0 Protein 3e-86 98
LRI_2025 YP_008111028.1 chloramphenicol acetyltransferase NC_010111.5787932.p0 Protein 1e-52 55
LRI_2025 YP_008111028.1 chloramphenicol acetyltransferase CP001581.1.gene2168. Protein 9e-40 43
LRI_2025 YP_008111028.1 chloramphenicol acetyltransferase CP004022.1.gene799.p Protein 4e-35 42