Gene Information

Name : LRI_1940 (LRI_1940)
Accession : YP_008111015.1
Strain :
Genome accession: NC_021503
Putative virulence/resistance : Resistance
Product : transcriptional regulator CadC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 48486 - 48836 bp
Length : 351 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAGCAAAAGTGCTGACATTACTTGTGATCAGACATTGGTTGAGACAGATAAAGTAATGAAGGTCTCGGAATTCTT
GGGTAAATCACGTATTAAGAAATACTTTTATGTATTGTCTAAAATCTCAGATGAGAAAAAGTTAAAAATCATTTTCTCTT
TAATCGCTCAGGAATCGTTATGTGTTTGTGATATTGCATATATTTTAGGCTGTAGTATTGCAACCGCTTCTCATCACTTA
AGAATGCTGTATGATGCTGACATTTTAGACCGTCAAAAAAGGGGGAAAATGGTGTACTACTTTATAAAAGATGATGATCT
GAAAAAAATACTTGCTCAACTTGACAGGTGA

Protein sequence :
MKSKSADITCDQTLVETDKVMKVSEFLGKSRIKKYFYVLSKISDEKKLKIIFSLIAQESLCVCDIAYILGCSIATASHHL
RMLYDADILDRQKRGKMVYYFIKDDDLKKILAQLDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadX YP_254239.1 cadmium efflux system accessory protein CadX Not tested ¥ðSh1 Protein 4e-20 50
cadC YP_189777.1 CadC family transcriptional regulator Not tested vSe1 Protein 2e-21 50
cadX YP_252015.1 hypothetical protein Not tested SCCmec Protein 3e-17 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LRI_1940 YP_008111015.1 transcriptional regulator CadC BAC0059 Protein 3e-20 44