Gene Information

Name : A225_NDM1p0005 (A225_NDM1p0005)
Accession : YP_008110693.1
Strain :
Genome accession: NC_021501
Putative virulence/resistance : Unknown
Product : IS1 orfB-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 10527 - 11030 bp
Length : 504 bp
Strand : +
Note : -

DNA sequence : 
ATGCCGGGCAACCGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGT
AACCTCGCGCATACAGCCGGGCAGTGATGTGATTGTCTGCGCTGAAATGGACGAACAGTGGGGCTACGTCGGTGCTAAAT
CACGTCAGCGCTGGCTGTTTTACGCGTATGACAGGATACGGAGGACGGTTGTGGCGCACGTCTTCGGTGAACGCACTCTG
GCCACACTGGAGCGTCTTCTGAGCCTGCTGTCGGCCTTTGAGGTCGTGGTATGGATGACGGATGGCTGGCCGCTGTATGA
ATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGTTACACTCAGCGAATTGAGCGGCATAACCTGAATCTGAGAC
AACATCTGGCAAGGCTGGGACGGAAGTCACTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAGGTCATCGGGCATTAT
CTGAACATAAAACACTATCAGTAA

Protein sequence : 
MPGNRPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY
LNIKHYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 6e-49 98
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 9e-67 98
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 9e-65 97
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 9e-65 97
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 5e-64 96
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 3e-64 96
aec38 AAW51721.1 InsB Not tested AGI-3 Protein 2e-49 96
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 9e-64 94
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 1e-66 94
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 1e-66 94
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 1e-66 94
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 6e-64 93

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A225_NDM1p0005 YP_008110693.1 IS1 orfB-like protein VFG0612 Protein 3e-64 94