Gene Information

Name : A225_NDM1p0160 (A225_NDM1p0160)
Accession : YP_008110775.1
Strain :
Genome accession: NC_021501
Putative virulence/resistance : Virulence
Product : Putative transglycosylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 94664 - 95140 bp
Length : 477 bp
Strand : +
Note : -

DNA sequence : 
ATGAAACGGATTGCTCTTACGTTTTTAATGTTGGCTTTTTCTGGAATGTTGAACGCTGCTGATTGTTTTGATCTGGCAGG
AAGGGATTATCATATAGATCCGGATCTGCTTCGGGCAATCTCCTGGAATGAATCGAACTTCCGCACATACGTAAAAGGCT
ACAATCCTGTTTCGGGTTTTGGCTCCGGACTTATGCAGGTGGACTCCCAGCACTTTAACGAACTGGCTCGTTATGGAATA
AAACCGGAGCATCTTCTTTCCGATCCGTGTATGAATATCTACACCGGGGCTTACTATCTTGCAATTGCATTCAAAAAGTG
GGGAGTCAGCTGGCAGGCCGTGGGCGCTTATAATGCAGGTTTCAGGAAAACAGAAGAACAGGCGCAGAGAAGATATGTCT
ATGCCAGAAAAATTGAGGCAACATATCGGGCTATAAAGAATAATAAAAATGCAGCGCAGACTCTTGCAAAACAGTAA

Protein sequence : 
MKRIALTFLMLAFSGMLNAADCFDLAGRDYHIDPDLLRAISWNESNFRTYVKGYNPVSGFGSGLMQVDSQHFNELARYGI
KPEHLLSDPCMNIYTGAYYLAIAFKKWGVSWQAVGAYNAGFRKTEEQAQRRYVYARKIEATYRAIKNNKNAAQTLAKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z5131 NP_290279.1 hypothetical protein Not tested LEE Protein 8e-24 42
unnamed AAK26704.1 unknown Not tested LEE Protein 4e-24 42
ECs4579 NP_312606.1 hypothetical protein Not tested LEE Protein 8e-24 42
ECO103_3629 YP_003223486.1 hypothetical protein Not tested LEE Protein 6e-24 42
ECO26_5260 YP_003232142.1 hypothetical protein Not tested LEE Protein 6e-24 42
unnamed AAC31524.1 L0045 Not tested LEE Protein 6e-24 42
unnamed ACU09469.1 putative lytic transglycosylase Not tested LEE Protein 6e-24 42
unnamed AAL57531.1 unknown Not tested LEE Protein 4e-24 42
st13 CAC81851.1 ST13 protein Not tested LEE II Protein 4e-24 42
unnamed CAI43885.1 hypothetical protein Not tested LEE Protein 4e-24 42
ECO111_3763 YP_003236099.1 hypothetical protein Not tested LEE Protein 5e-24 41
unnamed AAC38373.1 rOrf3 Not tested LEE Protein 3e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A225_NDM1p0160 YP_008110775.1 Putative transglycosylase VFG0823 Protein 2e-24 42
A225_NDM1p0160 YP_008110775.1 Putative transglycosylase VFG0719 Protein 1e-23 41