Gene Information

Name : fliP (H650_05520)
Accession : YP_008106948.1
Strain : Enterobacter sp. R4-368
Genome accession: NC_021500
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1023155 - 1023892 bp
Length : 738 bp
Strand : +
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGCGCCGTTTGTTCTCTTTTGCGCTGGCCGGATTATGGCTGGTTGCCCCTGCGGCATTTGCACAACTTCCGGGTTTGAT
TAGCCAGCCGATAGCCGGTGGCGGCCAGAGCTGGTCGCTGCCTGTGCAGACGCTGGTATTTATTACCTCGCTCACCTTCC
TGCCCGCCATTTTGCTGATGATGACCAGCTTTACACGCATCATCATTGTGTTCGGCCTGCTGCGAAACGCGCTGGGAACA
CCCTCTGCGCCGCCGAACCAGGTGCTGCTTGGGCTGGCGCTGTTTTTAACCTTTTTTATTATGTCGCCGGTGATCGACAA
GATTTATACCGACGCCTATCAGCCGTTTAGCGAGAATAAAATCTCTGTCGATGTGGCGCTGGAACGCGGCGCACAACCGC
TGCGTGAATTTATGCTGCGCCAGACGCGCGAAGCCGATTTGGCGCTGTTTGCCCGTCTCTCTAATAGCCCGCCGATTCAG
GGGCCGGAAGCCGTATCGATGCGCATTTTGTTGCCCGCTTATGTCACCAGCGAGCTGAAAACCGCATTCCAGATTGGTTT
TACAATCTTTATTCCGTTCCTGATTATCGATCTGGTGATCGCCAGCGTTCTGATGGCGCTCGGGATGATGATGGTACCGC
CCGCAACCATTGCCCTGCCGTTCAAACTGATGTTGTTTGTGCTGGTGGATGGCTGGCAGTTACTGGTCAGCTCGCTCGCC
CAGAGCTTTTACAGTTAG

Protein sequence : 
MRRLFSFALAGLWLVAPAAFAQLPGLISQPIAGGGQSWSLPVQTLVFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGT
PSAPPNQVLLGLALFLTFFIMSPVIDKIYTDAYQPFSENKISVDVALERGAQPLREFMLRQTREADLALFARLSNSPPIQ
GPEAVSMRILLPAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATIALPFKLMLFVLVDGWQLLVSSLA
QSFYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 3e-29 44
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 3e-29 44
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 6e-26 42
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 6e-26 42
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 6e-26 42
lscR AAO18040.1 LscR Virulence TTSS locus Protein 2e-30 42
escR YP_003236103.1 T3SS structure protein EscR Virulence LEE Protein 6e-31 42
escR AAK26700.1 EscR Virulence LEE Protein 4e-31 42
escR NP_290283.1 type III secretion system protein Virulence LEE Protein 6e-31 42
escR AAL57527.1 EscR Virulence LEE Protein 4e-31 42
escR CAC81847.1 EscR protein Virulence LEE II Protein 4e-31 42
escR CAI43889.1 EscR protein Virulence LEE Protein 4e-31 42
ECs4583 NP_312610.1 type III secretion system protein Virulence LEE Protein 2e-30 42
escR AAC31528.1 L0049 Virulence LEE Protein 4e-31 42
escR ACU09473.1 type III secretion system protein EscR Virulence LEE Protein 4e-31 42
escR YP_003223490.1 T3SS structure protein EscR Virulence LEE Protein 6e-31 42
escR YP_003232138.1 type III secretion system protein Virulence LEE Protein 6e-31 42
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 2e-30 41
escR AAC38369.1 EscR Virulence LEE Protein 2e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_008106948.1 flagellar biosynthesis protein FliP VFG2338 Protein 1e-91 85
fliP YP_008106948.1 flagellar biosynthesis protein FliP VFG2494 Protein 1e-74 68
fliP YP_008106948.1 flagellar biosynthesis protein FliP VFG1259 Protein 7e-63 58
fliP YP_008106948.1 flagellar biosynthesis protein FliP VFG2016 Protein 1e-59 55
fliP YP_008106948.1 flagellar biosynthesis protein FliP VFG0394 Protein 3e-31 43
fliP YP_008106948.1 flagellar biosynthesis protein FliP VFG0044 Protein 6e-34 42
fliP YP_008106948.1 flagellar biosynthesis protein FliP VFG0188 Protein 1e-33 42
fliP YP_008106948.1 flagellar biosynthesis protein FliP VFG0827 Protein 3e-31 42
fliP YP_008106948.1 flagellar biosynthesis protein FliP VFG0715 Protein 1e-30 41