Gene Information

Name : H650_18220 (H650_18220)
Accession : YP_008109398.1
Strain : Enterobacter sp. R4-368
Genome accession: NC_021500
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3640097 - 3640576 bp
Length : 480 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGGGTACATCTTTTCATCCGCAGTATGGCTCGCTGTCCCTGAACACGCTGAGGACAGTAAAACGAGCTCTTAACCTGCT
TGACCGACATCTGCACGAAACAGGCGTGGCATTTACCTCTACCCAAGCAGCTCGTGACTGGCTGAAACTGAAAATGGCGG
GGCTGGAGCGTGAAGAGTTTATGGTGATGTATCTGAATCAACAGAATCAGTTGATTGCCCATGAAACTCTATTTGCCGGT
TCCATCAGCAGCACCGAGGTACATCCCCGTGAGGTGGTCAAACGCGCCCTGTATTTCAATGCAGCCGCAGTGATACTGGC
GCATAACCATCCCTCCGGCGACACCACGCCCAGCCAGGCAGATAAGACCATCACGCAGCGTCTGGTGCAGGCGCTTCAGC
TCGTTGATATCCGTGTGCCTGACCATCTCATCGTCGGTGGCACGCAGATATTGTCGTTCGCTGAACACGGTCTGCTTTGA

Protein sequence :
MGTSFHPQYGSLSLNTLRTVKRALNLLDRHLHETGVAFTSTQAARDWLKLKMAGLEREEFMVMYLNQQNQLIAHETLFAG
SISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGTQILSFAEHGLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1217 NP_286752.1 RadC family DNA repair protein Not tested TAI Protein 7e-50 80
z1217 CAD33787.1 Z1217 protein Not tested PAI I 536 Protein 5e-50 80
unnamed CAD42098.1 hypothetical protein Not tested PAI II 536 Protein 3e-50 80
yeeS CAI43901.1 YeeS protein Not tested LEE Protein 3e-50 80
unnamed AAL08475.1 unknown Not tested SRL Protein 4e-50 80
yeeS CAE85201.1 YeeS protein Not tested PAI V 536 Protein 2e-50 80
yeeS CAI43846.1 YeeS protein Not tested LEE Protein 4e-50 80
yeeS ADD91702.1 YeeS Not tested PAI-I AL862 Protein 4e-50 80
unnamed AAL67345.1 intergenic-region protein Not tested PAI II CFT073 Protein 3e-50 80
unnamed AAK00479.1 unknown Not tested SHI-1 Protein 3e-50 79
unnamed CAD66203.1 hypothetical protein Not tested PAI III 536 Protein 1e-50 79
Z1657 NP_287160.1 RadC family DNA repair protein Not tested TAI Protein 2e-48 79
yeeS NP_838484.1 RADC family DNA repair protein Not tested SHI-1 Protein 4e-50 79
aec73 AAW51756.1 Aec73 Not tested AGI-3 Protein 2e-50 79
yeeS NP_708770.1 RADC family DNA repair protein Not tested SHI-1 Protein 4e-50 79
yeeS AAZ04458.1 putative RadC-like protein Not tested PAI I APEC-O1 Protein 3e-50 78
yeeS YP_854323.1 radC-like protein YeeS Not tested PAI I APEC-O1 Protein 4e-50 78
c5152 NP_757000.1 radC-like protein yeeS Not tested PAI II CFT073 Protein 4e-50 78
ECO103_3589 YP_003223446.1 radC-like protein YeeS Not tested LEE Protein 4e-50 78
VC1786 NP_231421.1 DNA repair protein RadC Not tested VPI-2 Protein 1e-25 55
VC0395_A1383 YP_001217326.1 DNA repair protein RadC Not tested VPI-2 Protein 1e-25 55
VPI2_0034 ACA01849.1 DNA repair protein RadC Not tested VPI-2 Protein 6e-26 55
VC0510 NP_230161.1 DNA repair protein RadC-like protein Not tested VSP-2 Protein 8e-24 52
radC AAN62140.1 putative DNA repair protein RadC Not tested PAGI-2(C) Protein 4e-25 45
radC AAN62275.1 putative DNA repair protein RadC Not tested PAGI-3(SG) Protein 6e-26 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H650_18220 YP_008109398.1 hypothetical protein VFG1528 Protein 2e-50 80
H650_18220 YP_008109398.1 hypothetical protein VFG1617 Protein 1e-50 80
H650_18220 YP_008109398.1 hypothetical protein VFG1066 Protein 2e-50 80
H650_18220 YP_008109398.1 hypothetical protein VFG1678 Protein 4e-51 79
H650_18220 YP_008109398.1 hypothetical protein VFG0660 Protein 1e-50 79
H650_18220 YP_008109398.1 hypothetical protein VFG1119 Protein 3e-26 55