Gene Information

Name : H650_14860 (H650_14860)
Accession : YP_008108772.1
Strain : Enterobacter sp. R4-368
Genome accession: NC_021500
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2941937 - 2943310 bp
Length : 1374 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
GTGAGCGACGGCTGGCAAGAGGAACTTACCCGCTGGCAGCAGGCCACACAACGCCAGCTTGAGCAGACAGAGCCGGTAAA
CGTTATCGGCTCGGTAACCGGGATTAGCGGCATCGTTTTACAGTGTTATCTTCCGGGCGCGCGCTTAGGAGACTTATGCC
TTTTGCCGCGCACGTCAGGCGCGCCGATTATGGCTGAAGTAATTGGCTTTGATTCGCAAGAGGTTTCACTTGCCGCCCTG
GATACGCTGGAAGGCATTAAGCCCGGTTCAGAGGTCCATCCTTTAGGTTTGCCCCACAGCATACAGGTCTCGCCAGCGCT
GAAAGGGTGCGTATTCGATGGGTTTGGTCGTGCTCTTGGCGGGCAGGGTCAGGCCGCTTTTGTCGACACCTTAACCGCGC
GATCTGTACCGGTGATGCATAACGCCACGCCGGCGACCGATCGCCTGTGTATTGAGACGCCGCTCTACACCGGGCTCAGC
AGTATTGACGGTTTGCTGACGCTGGGTGCAGGCCAGCGGGCGGGGATTTTTGCCGGGGCGGGATGCGGTAAAACAACGCT
GCTGGCGGAGCTGGCGCGAAATATACCGTGCGACACTATCGTGTTTTGCCTGACGGGTGAGCGCGGGCGCGAGCTGCGTG
AGTTTATGGACAGGGAGTTGGATGAAGCGCTACGTCAGCGCACCGTGCTCGTGTGCGCCACCTCGGATCGCAGCAGCATG
GAGCGTGTGCGCGCTGCGTTTACGGCCACCGCCATCGCCGAAGGGTTTCGCCAGCAAGGGGAATCGACTTTGCTCATTGT
TGATTCGCTGACACGTCTTGCCCGCGCACAGCGCGAAATCGGGCTTGCCAACGGCGAACCGCCGGGGCGCAATGGCTTTC
CTCCTTCGGTTTACAACCTGCTCTCGCGGCTGGTTGAACGCAGTGGACGTACCCGGCAGGGCACTATCACCGCGCTGTAT
TCGGTACTGGTTGAACAAGATTCGATGCACGACCCGATTGCTGACGAAGTGCGCTCTTTAGTGGACGGGCATATTATCCT
TTCGCGCAAACTGGCCGATCAGGGACATTATCCCGCCATTGATGTGGCAGCCAGCCTGAGTCGGGTGATGAATAATATTA
CGGGAACTGAACAGCAAACTATTGCCACACATATAAGGCAATTAATGACGGCCTATGCCGATATCGAAATGTTAATTCGT
CTGGGCGAATACCAGACCGGCAGCGATCCCTTTACCGATTACGCGGTTGCGGTTAAACCGGCACTGGATAATGTTCTCAA
ACAATCATTACGCGCGCTGCGAGCGCCTGAAATAACCTTAAATCAATTACGGGAGATCGTGGCGAATGCTCCGGGTCCGC
AAGGTGTTTTATAA

Protein sequence :
MSDGWQEELTRWQQATQRQLEQTEPVNVIGSVTGISGIVLQCYLPGARLGDLCLLPRTSGAPIMAEVIGFDSQEVSLAAL
DTLEGIKPGSEVHPLGLPHSIQVSPALKGCVFDGFGRALGGQGQAAFVDTLTARSVPVMHNATPATDRLCIETPLYTGLS
SIDGLLTLGAGQRAGIFAGAGCGKTTLLAELARNIPCDTIVFCLTGERGRELREFMDRELDEALRQRTVLVCATSDRSSM
ERVRAAFTATAIAEGFRQQGESTLLIVDSLTRLARAQREIGLANGEPPGRNGFPPSVYNLLSRLVERSGRTRQGTITALY
SVLVEQDSMHDPIADEVRSLVDGHIILSRKLADQGHYPAIDVAASLSRVMNNITGTEQQTIATHIRQLMTAYADIEMLIR
LGEYQTGSDPFTDYAVAVKPALDNVLKQSLRALRAPEITLNQLREIVANAPGPQGVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 9e-130 64
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 4e-133 64
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 2e-133 64
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 1e-133 64
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 1e-138 63
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 4e-111 58
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 1e-118 58
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 1e-118 58
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 3e-109 58
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 2e-116 56
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 8e-112 55
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 8e-112 55
lscN AAO18044.1 LscN Virulence TTSS locus Protein 4e-87 48
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-81 48
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 8e-81 47
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 8e-81 47
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-80 47
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 2e-81 46
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-80 46
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-80 46
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-80 46
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 2e-80 46
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-75 45
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 3e-75 45
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-75 45
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-76 45
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 1e-75 45
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 1e-77 44
escN CAC81862.1 EscN protein Virulence LEE II Protein 2e-72 44
escN AAK26715.1 EscN Virulence LEE Protein 2e-72 44
escN AAL57542.1 EscN Virulence LEE Protein 2e-72 44
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 3e-72 44
escN CAI43874.1 EscN protein Virulence LEE Protein 7e-73 44
escN YP_003223475.1 translocator EscN Virulence LEE Protein 9e-73 44
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 7e-72 43
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 7e-72 43
unnamed AAL06369.1 EscN Virulence LEE Protein 2e-72 43
escN NP_290268.1 hypothetical protein Virulence LEE Protein 1e-71 43
ECs4568 NP_312595.1 EscN Virulence LEE Protein 1e-71 43
escN YP_003236088.1 translocator EscN Virulence LEE Protein 5e-72 43
escN AAC31513.1 L0034 Virulence LEE Protein 1e-71 43
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 1e-71 43
escN AAC38383.1 EscN Virulence LEE Protein 9e-72 43
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 4e-63 42
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 2e-59 42
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 7e-60 42
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 7e-60 42
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 7e-60 42
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 7e-60 42
invC AAS66861.1 InvC Not tested SSR-2 Protein 3e-62 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H650_14860 YP_008108772.1 hypothetical protein VFG0390 Protein 5e-87 52
H650_14860 YP_008108772.1 hypothetical protein VFG0192 Protein 3e-89 50
H650_14860 YP_008108772.1 hypothetical protein VFG0048 Protein 5e-88 46
H650_14860 YP_008108772.1 hypothetical protein VFG1254 Protein 2e-67 46
H650_14860 YP_008108772.1 hypothetical protein VFG0515 Protein 6e-76 45
H650_14860 YP_008108772.1 hypothetical protein VFG2144 Protein 2e-84 44
H650_14860 YP_008108772.1 hypothetical protein VFG2459 Protein 2e-68 43
H650_14860 YP_008108772.1 hypothetical protein VFG0730 Protein 5e-72 43
H650_14860 YP_008108772.1 hypothetical protein VFG0812 Protein 6e-72 43
H650_14860 YP_008108772.1 hypothetical protein VFG0555 Protein 3e-60 42
H650_14860 YP_008108772.1 hypothetical protein VFG1778 Protein 7e-63 41