Gene Information

Name : H650_11390 (H650_11390)
Accession : YP_008108092.1
Strain : Enterobacter sp. R4-368
Genome accession: NC_021500
Putative virulence/resistance : Virulence
Product : ligand-gated channel protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2253562 - 2255751 bp
Length : 2190 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGAAATCTCGTTATCTTTGGGCATTAAATCCTTGTTTATTGATGATGTTTTCCGCTCACGCCTCGGCGGAAGGTCAAAA
AGAAGAGACACTGGTGGTTGCCGCCAGCCGCGCAAACCACAGCGTTACGGATATGGCGCAAACCACCTGGGTCATTGAAC
AGGCTGAGATTGAGCAGCAGGTTCAGGGCGGAAAAGAGTTAAAAGAGGTGCTGGCGCAGCTAATTCCCGGGATGGACGTC
AGCAGCCAGGGACGCACCAATTACGGTATGAATTTGCGCGGCCGTTCAATGATGGTGATGGTCGACGGTGTACGTCTGAA
CTCGTCCCGCAGCGACAGCCGCCAGCTCGATGCTATCGATCCGTTTAACATTGCGCGCATCGAAGTGATTTCCGGCGCAA
CATCGCTGTACGGCGGCGGCAGTACCGGTGGTTTAATCAATATCGTCACCAAGAAAGGCCAGCCAGAAACCGAGGTTGAG
TTCCAGACCGGCACGAAAAGCGGTTTTAACAGCCATAACGATCACGACGAGAACATCGCGGCTGCGGTCAGCGGCGGTAA
CGATAACGCGTCGGGTCGCCTCTCGGTGGCGTACCAGCGCTATGGCGGCTGGTACGACGGCAAAGGCAATGAAGTGATCA
TTGATAACACGCAAACCGGTTTGCAGTACTCAGACCGCCTGGATGTAATGGGTACCGGCACGCTGAATATCGACGATCAT
CAGCAGTTACAGCTCACCACGCAGTATTACAAAAGCCAGTCTGACGGTAAGCACGGCCTTTTCCTTGGCGAAAACTTCTC
GGCGGTGCGCGGCTCCGGCAACGCTTACAACAAAAGCAATCTTGATTCCGACCGCATCCCCGGCACCGAACGCCACTTAA
TTAACCTGCAATACGCCAACAGCGATTTCTGGGGCCAGGATTTACTGGCGCAGATTTACTACCGTGACGAAAGCCTGACC
TATTATCCCTTCCCGACGCTTTCCGGCGGCTCGGTGACCAGCATTGGCGCATCGCAGCAAAAAACCGATTTCTACGGCGG
CAAACTCACTCTCAACAGCAAACCGCTGGAAGATCTGACATTGACCTGGGGCGTGGACGCCGAACATGAAACCTTCGATG
CCAACCAACAATTTTTCAATCTCAGCAACGCCGCCGCCAGCGGTGGGATGAAACTGGATAACGCTTATAACGTCGGGCGC
TATCCCGGCTACAGCATCACGAACCTCGCGCCGTTCCTGCAAAGCAGCTATGACATTGCGGCCATCACCCTGAGCGGTGG
CGTGCGCTACCAGTACACGGAAAACAGAGTCGACGACTTTGTGGGCTACGCGCAGCAGCAAGCCATCGCCACCGGCAAGG
CGACCTCGGCAGACGCGGTGCCAGGCGGCAAAACGGATTACAACAATCTGCTGTTCAACGCCGGCATCCTCGGTCATCTG
AGCGAACGCCAGCAGGTGTGGTTTAACTTCTCGCAAGGCTTTGAAATCCCGGACCTGGCGAAATATTACGGTTCCGGCAC
CTACAAGCTGGAAAACGGCCACTACCGTCTGGTTAACAGCGTCAACGTGAACGATTCGAAGCTGGACGGCATTAAAGTGA
ATGCCTACGAGCTGGGCTGGCGCTTCACCGGCGATAGCCTGCGTACGCAGATCGCCGCGTACTACTCGCTTTCGGATAAA
ACCATCAACATCAACAAAAGCGACATGACCATCAATATTGAAGATGATCAGCGTCGTATTTACGGTGTGGAAGGTCAGGT
CGATTACTTCTTTAGCAACAGCGAGTGGAGCACCGGCGCAAACTTTAACGCCATCAAGTCGCAAACCCGCGTCGATGGCA
AGTGGCAGAAACTGACCGTGGATAGCGCCAGCCCGTCGAAAATGAGCGCGTGGGTCAACTGGGCGCCAGGCGACTGGACG
TTACGCCTGCAAAGCACGCAGACCTTTGATCTTTCTGACGCCGATGGGAAACATATTGACGGGTACAACACCGTTGACCT
GCTCGGCAGCTACCTTCTGCCCGTCGGTAAGTTGAGTTTTAGCGTTGAAAACCTGCTGGACGAAGATTACACCACCGCGT
GGGGACAACGCGCACCGGGTTTATACAGCCCAACCTACGGCGCAGCGGGTTTATATACCTATAAAGGCCGCGGCCGTACG
TTTGGCCTGAATTATTCCGTTCTGTTCTGA

Protein sequence :
MKSRYLWALNPCLLMMFSAHASAEGQKEETLVVAASRANHSVTDMAQTTWVIEQAEIEQQVQGGKELKEVLAQLIPGMDV
SSQGRTNYGMNLRGRSMMVMVDGVRLNSSRSDSRQLDAIDPFNIARIEVISGATSLYGGGSTGGLINIVTKKGQPETEVE
FQTGTKSGFNSHNDHDENIAAAVSGGNDNASGRLSVAYQRYGGWYDGKGNEVIIDNTQTGLQYSDRLDVMGTGTLNIDDH
QQLQLTTQYYKSQSDGKHGLFLGENFSAVRGSGNAYNKSNLDSDRIPGTERHLINLQYANSDFWGQDLLAQIYYRDESLT
YYPFPTLSGGSVTSIGASQQKTDFYGGKLTLNSKPLEDLTLTWGVDAEHETFDANQQFFNLSNAAASGGMKLDNAYNVGR
YPGYSITNLAPFLQSSYDIAAITLSGGVRYQYTENRVDDFVGYAQQQAIATGKATSADAVPGGKTDYNNLLFNAGILGHL
SERQQVWFNFSQGFEIPDLAKYYGSGTYKLENGHYRLVNSVNVNDSKLDGIKVNAYELGWRFTGDSLRTQIAAYYSLSDK
TININKSDMTINIEDDQRRIYGVEGQVDYFFSNSEWSTGANFNAIKSQTRVDGKWQKLTVDSASPSKMSAWVNWAPGDWT
LRLQSTQTFDLSDADGKHIDGYNTVDLLGSYLLPVGKLSFSVENLLDEDYTTAWGQRAPGLYSPTYGAAGLYTYKGRGRT
FGLNYSVLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iutA NP_839219.1 ferric siderophore receptor Virulence SHI-2 Protein 0.0 67
iutA NP_709458.2 ferric siderophore receptor Virulence SHI-2 Protein 0.0 67
iutA AAD44750.1 IutA Virulence SHI-2 Protein 0.0 67
iutA YP_002414042.1 Ferric aerobactin receptor Virulence Not named Protein 0.0 67
iutA AAK71635.1 IutA Virulence SHI-3 Protein 0.0 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H650_11390 YP_008108092.1 ligand-gated channel protein VFG0619 Protein 0.0 67
H650_11390 YP_008108092.1 ligand-gated channel protein VFG0936 Protein 0.0 67
H650_11390 YP_008108092.1 ligand-gated channel protein VFG1085 Protein 0.0 66