Gene Information

Name : H650_11370 (H650_11370)
Accession : YP_008108088.1
Strain : Enterobacter sp. R4-368
Genome accession: NC_021500
Putative virulence/resistance : Virulence
Product : amino acid ABC transporter substrate-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2249033 - 2250067 bp
Length : 1035 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGTTAGAACTGGCAACAATTTCGAAAAGCTTTGCCGCTGCGCGCGTGCTGGATGACGTCAATCTGGTGATTCCTGCGGG
TAGCCGCACGGCGATTGTCGGCCCGTCCGGGTCGGGGAAAACCACGCTGTTGCGTTTGATCGCCGGGTTTGAAATGCCGG
ACAGCGGGCGTATCGAGTTGCAGGGAAAAACCTTGTTTGGCGATGGCCAGTTTGTCCCGGCTCACCAACGCAACATTGGC
TTTGTGCCGCAAGAAGGCGCGCTGTTTCCGCACCTTCGCGTCGGCGAAAACATTGCCTGGGGGCTTAAAGGTTCGCGCCA
CGAGAAGCAACGCCGTGTCGATGAGTTAATGGCGATGGTGTCGCTGGACAGCAAGCTGGCGGCGCGCTGGCCGCATGAGA
TCTCCGGTGGTCAGCAGCAACGTGTGGCGCTGGCCAGAGCGCTGGCGCAGAAACCGGCGCTGATGTTGCTCGACGAACCG
TTTTCGGCGCTGGACACTGGCCTGCGCGCCGCCACGCGTAAAGCCACGGCGGATTTGCTGACTGAAGCCGGTGTTGCATC
CATTCTGGTTACTCACGATCAGAAAGAAGCACTCTCCTTCGCCAGCCAGATTGTGGTGATCCGCCACGGCCGCTTTGCGC
AGGTGGGATCGCCGTTCGCGGTCTATTCGCAACCGGTTGATGAGGAGACGGCGCTGTTTTTGGGTGATGCGCTGATTCTA
TCTGCTGATGTGGCACAAGGGCGTGCGCACTGTCTGCTTGGCGATGTGGCGGTGGATAACCCGGCGCTTTCTGGCGCTCA
TCGCATTATGTTGCGCCCGGAACAGGTGAGTGTGGTGCCGTGCGATGAGCATCAAACCTACCCGCAGGCACAAATTATCG
ATATGGATTTTGCCGGATACCTTTCGTCATTGACGCTGCTGTTTTCGCAAACCGGCGAACGCCTGACATTACAAGCCATC
ACCCGCCCGGACTGGCGACCTGGCATGAAAGTGAATCTGCAGGTTAACGGTAGCGCCCGCGTATTCCCCCGCTGA

Protein sequence :
MLELATISKSFAAARVLDDVNLVIPAGSRTAIVGPSGSGKTTLLRLIAGFEMPDSGRIELQGKTLFGDGQFVPAHQRNIG
FVPQEGALFPHLRVGENIAWGLKGSRHEKQRRVDELMAMVSLDSKLAARWPHEISGGQQQRVALARALAQKPALMLLDEP
FSALDTGLRAATRKATADLLTEAGVASILVTHDQKEALSFASQIVVIRHGRFAQVGSPFAVYSQPVDEETALFLGDALIL
SADVAQGRAHCLLGDVAVDNPALSGAHRIMLRPEQVSVVPCDEHQTYPQAQIIDMDFAGYLSSLTLLFSQTGERLTLQAI
TRPDWRPGMKVNLQVNGSARVFPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 8e-29 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H650_11370 YP_008108088.1 amino acid ABC transporter substrate-binding protein BAC0162 Protein 4e-50 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H650_11370 YP_008108088.1 amino acid ABC transporter substrate-binding protein VFG0344 Protein 5e-50 43
H650_11370 YP_008108088.1 amino acid ABC transporter substrate-binding protein VFG1206 Protein 6e-52 42