Gene Information

Name : xerD (H650_10790)
Accession : YP_008107975.1
Strain : Enterobacter sp. R4-368
Genome accession: NC_021500
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2106350 - 2107246 bp
Length : 897 bp
Strand : -
Note : site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d

DNA sequence :
ATGGAACAGGATCTCGTACGTATCGAACAGTTTCTCGATGCTCTCTGGCTTGAGAACAACCTGGCGGAAAATACGCTAAA
CGCTTACCGCCGCGATTTGAAAATCGTGGTGGAGTGGCTGCACCACCACGCCAGCAGTCTTGAAAAAGCGCAAAGCGATG
ATTTACAAGCGCTGTTAGCTGAAAGGGTGAGCGGTGGTTATAAGGCCACCAGCTCGGCGCGCTTGCTTAGCGCCGTGCGG
CGTTTTTTTCAGTACCTTTATCGGGAAAAAATACGCAGCGACGATCCCAGCGCTTTACTCGCATCACCTAAATTGCCGCA
ACGTTTACCGAAAGACTTGAGTGAAACGCAGGTGGGCAGGCTTTTGCAGGCGCCGGTGGTTGACCAACCGCTGGAGTTAC
GCGATAAAGCGATGCTTGAGGTGTTGTATGCCACCGGCCTTCGCGTCTCTGAACTGGTTGGCCTGACGATGAGTGATATC
AGCCTGCGCCAGGGCGTGGTGCGAGTGATTGGTAAAGGTAATAAAGAACGCCTGGTGCCGCTGGGCGAAGAGGCGGTGTA
CTGGGTCGAAAACTATCTGGAGCATGGTCGCCCCTGGCTGCTAAACGGTGTCTCGATTGATGTGCTGTTTCCCAGCCAGC
GCGCGCAGCAGATGACGCGCCAGACTTTCTGGCACCGCATCAAGCACTATGCGGCGCTTGCGGGCATCGACAGTGAAAAG
CTCTCGCCCCACGTTTTGCGCCATGCGTTTGCCACTCATCTGCTGAACCACGGCGCGGATCTGCGCGTGGTGCAAATGCT
TTTAGGCCACCAGGATTTATCGACCACGCAAATTTATACGCATGTCGCTACCGAGCGACTGCGCAAGCTTCATCAACAGC
ATCACCCGCGGGCGTGA

Protein sequence :
MEQDLVRIEQFLDALWLENNLAENTLNAYRRDLKIVVEWLHHHASSLEKAQSDDLQALLAERVSGGYKATSSARLLSAVR
RFFQYLYREKIRSDDPSALLASPKLPQRLPKDLSETQVGRLLQAPVVDQPLELRDKAMLEVLYATGLRVSELVGLTMSDI
SLRQGVVRVIGKGNKERLVPLGEEAVYWVENYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAALAGIDSEK
LSPHVLRHAFATHLLNHGADLRVVQMLLGHQDLSTTQIYTHVATERLRKLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-61 59
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-61 59