|
Name : lysS (H650_10770) Accession : YP_008107971.1 Strain : Enterobacter sp. R4-368 Genome accession: NC_021500 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 2101159 - 2102676 bp Length : 1518 bp Strand : - Note : class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA DNA sequence : ATGTCTGAACAACAAGCACAAGGCGCTGACGCGGCAGTCGATCTTAATAATGAACTGAAAACTCGCCGCGAGAAGCTGGC GCAACTGCGTGAGCAGGGCGTGGCGTTCCCGAACGATTTCCGTCGCGATCAGACCTCTGACAAGCTACATGCGGAATTCG ATGCCAAAGAGAACGAAGAGCTGGAAGCGCTGGGCATTGAAGTCGCCGTTGCGGGCCGTATGATGACCCGCCGCATCATG GGTAAAGCCTCTTTCGTAACCTTGCAGGACATGGGGGGCCGCATTCAGCTGTATGTCTCTCGTGACGATCTGGCGGAAGG TGTCTACAACGAGCAGTTCAAAAAATGGGATCTCGGCGATATCCTCGGCGCGCGCGGCAAGCTGTTCAAGACCAAGACCG GTGAACTCTCTATCCATTGCACCGAGCTGCGCCTGCTGACTAAAGCGCTGCGTCCGTTGCCGGACAAATTCCACGGTTTG CAGGATCAGGAAGCGCGCTATCGTCAGCGTTACCTGGATCTCATCTCGAATGATGAATCCCGCAACACTTTCAAAATTCG CTCGCAGATCCTGGCCGGTATCCGCCAGTTCATGGTAGGCCGCGACTTTATGGAAGTGGAAACGCCGATGATGCAGGTGA TCCCGGGCGGTGCGTCTGCGCGTCCGTTTGTCACCCACCATAATGCGCTGGATCTCGACATGTACCTGCGTATCGCGCCG GAACTGTACCTTAAACGTCTGGTGGTTGGCGGTTTCGAGCGCGTGTTCGAAATCAACCGTAACTTCCGTAACGAAGGTAT CTCCGTTCGCCATAACCCTGAGTTCACCATGATGGAACTCTATATGGCGTACGCGGATTATAAAGATCTGATCGAGCTGA CCGAATCTCTGTTCCGTACGCTTGCGCAGAACATCCTCGGCAAAACCGAAGTGCCGTACGGCGACGAAGTGTTTGATTTC GGCAAGCCGTTCGAAAAACTGACCATGCGCGAAGCGATCAAGAAATACCGTCCGGAAACCAACATGGCGGATCTGGATAA TTTCGACAGCGCGAAAGCAATTGCTGACAGCATCGGTATCAAGGTTGAGAAGAGCTGGGGTCTGGGCCGTATCGTCACGG AGATCTTCGAAGAAGTGGCCGAAGCGCACTTGATCCAGCCGACCTTCATTACCGAATACCCGGCGGAAGTTTCGCCGCTG GCGCGTCGTAACGATCAGAACCCGGAAATCACCGACCGCTTTGAGTTCTTCATTGGCGGACGTGAAATCGGTAACGGCTT TAGCGAGCTGAACGACGCGGAAGATCAGGCGCAGCGCTTCCAGGATCAGGTCGATGCGAAAGCAGCGGGCGACGACGAAG CAATGTTCTTCGACGAAGACTACGTGACCGCGCTGGAACACGGCTTACCGCCGACTGCCGGCCTGGGTATCGGTATCGAC CGTATGGTGATGCTGTTCACCAACAGCCATACCATTCGCGATGTGATCCTGTTCCCGGCGATGCGTCCGGTGAAATAA Protein sequence : MSEQQAQGADAAVDLNNELKTRREKLAQLREQGVAFPNDFRRDQTSDKLHAEFDAKENEELEALGIEVAVAGRMMTRRIM GKASFVTLQDMGGRIQLYVSRDDLAEGVYNEQFKKWDLGDILGARGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGL QDQEARYRQRYLDLISNDESRNTFKIRSQILAGIRQFMVGRDFMEVETPMMQVIPGGASARPFVTHHNALDLDMYLRIAP ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQNILGKTEVPYGDEVFDF GKPFEKLTMREAIKKYRPETNMADLDNFDSAKAIADSIGIKVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPL ARRNDQNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFQDQVDAKAAGDDEAMFFDEDYVTALEHGLPPTAGLGIGID RMVMLFTNSHTIRDVILFPAMRPVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-170 | 69 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-93 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_008107971.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 8e-171 | 69 |
