Gene Information

Name : H650_10010 (H650_10010)
Accession : YP_008107823.1
Strain : Enterobacter sp. R4-368
Genome accession: NC_021500
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1946405 - 1947112 bp
Length : 708 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGAAACTCCTTTTAATCGAAGATGAAGAGAAAATTTCGTCTTACATCAACACCGCGCTTCGCGAGCAAGGTTACAACGT
CGATGTCTGCGCCGACGGGCGCGAAGGGTTATTCCTGGCAACGGAGATGGACTACGACGCCATTATCCTGGATGTCATGC
TGCCGTCGATGGACGGGTATGCCGTCATCACCAGCCTGCGCAAACTGAAACAGACGCCGGTGCTGATGCTTTCCGCGCGC
GGTTCACTTGATGAGCGGGTTAAAGGGCTGCGACTGGGCGCGGATGATTACCTGACCAAACCGTTTTCGCTGATTGAGCT
GGTGGCGCGCATTCAGGCGCTGCTGCGCCGCCGACCGACCGATGGGCTTGATATTTCACAGTTGCAGGTCCACAACCTGC
AGCTCGATCTGCTCGCGCGCAAAGTGTACCGCAACGGTACGCGCATCGACCTGACGCAAAAGGAGTTTGCCCTGCTAAGT
CTGCTCGCCAGGCACCAGGGGGAAGTGCTGTCGAAAATGATGATTGCCGAGCAGGTCTGGGATATGAACTTTGAAAGCGA
CGCCAATATTGTCGAAGTCGCGATCAAACGTTTACGCGCCAAAATCGACTCCCCGTTTGAAGAGAAGCTGCTGCACACCG
TGCGCGGCATGGGTTACATCCTTGAGTATCGCGACGAAGATCCCGGCAAAATGAGTGCGTATGTTTAA

Protein sequence :
MKLLLIEDEEKISSYINTALREQGYNVDVCADGREGLFLATEMDYDAIILDVMLPSMDGYAVITSLRKLKQTPVLMLSAR
GSLDERVKGLRLGADDYLTKPFSLIELVARIQALLRRRPTDGLDISQLQVHNLQLDLLARKVYRNGTRIDLTQKEFALLS
LLARHQGEVLSKMMIAEQVWDMNFESDANIVEVAIKRLRAKIDSPFEEKLLHTVRGMGYILEYRDEDPGKMSAYV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-53 50
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 7e-52 49
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 5e-34 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 5e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H650_10010 YP_008107823.1 transcriptional regulator BAC0083 Protein 4e-60 59
H650_10010 YP_008107823.1 transcriptional regulator BAC0111 Protein 1e-58 54
H650_10010 YP_008107823.1 transcriptional regulator BAC0638 Protein 9e-52 54
H650_10010 YP_008107823.1 transcriptional regulator BAC0197 Protein 5e-57 52
H650_10010 YP_008107823.1 transcriptional regulator BAC0125 Protein 4e-61 52
H650_10010 YP_008107823.1 transcriptional regulator BAC0347 Protein 6e-50 50
H650_10010 YP_008107823.1 transcriptional regulator BAC0308 Protein 7e-55 49
H650_10010 YP_008107823.1 transcriptional regulator NC_012469.1.7685629. Protein 5e-33 43
H650_10010 YP_008107823.1 transcriptional regulator NC_002952.2859905.p0 Protein 1e-31 41
H650_10010 YP_008107823.1 transcriptional regulator NC_002745.1124361.p0 Protein 2e-31 41
H650_10010 YP_008107823.1 transcriptional regulator NC_009641.5332272.p0 Protein 2e-31 41
H650_10010 YP_008107823.1 transcriptional regulator NC_013450.8614421.p0 Protein 2e-31 41
H650_10010 YP_008107823.1 transcriptional regulator NC_007793.3914279.p0 Protein 2e-31 41
H650_10010 YP_008107823.1 transcriptional regulator NC_002758.1121668.p0 Protein 2e-31 41
H650_10010 YP_008107823.1 transcriptional regulator NC_003923.1003749.p0 Protein 2e-31 41
H650_10010 YP_008107823.1 transcriptional regulator NC_009782.5559369.p0 Protein 2e-31 41
H650_10010 YP_008107823.1 transcriptional regulator NC_002951.3237708.p0 Protein 2e-31 41
H650_10010 YP_008107823.1 transcriptional regulator NC_007622.3794472.p0 Protein 1e-31 41
H650_10010 YP_008107823.1 transcriptional regulator HE999704.1.gene1528. Protein 3e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H650_10010 YP_008107823.1 transcriptional regulator VFG0596 Protein 2e-53 50
H650_10010 YP_008107823.1 transcriptional regulator VFG1389 Protein 7e-40 47
H650_10010 YP_008107823.1 transcriptional regulator VFG1390 Protein 9e-39 43
H650_10010 YP_008107823.1 transcriptional regulator VFG1563 Protein 3e-34 41
H650_10010 YP_008107823.1 transcriptional regulator VFG1702 Protein 2e-34 41
H650_10010 YP_008107823.1 transcriptional regulator VFG1386 Protein 8e-38 41