Gene Information

Name : fliI (H650_09120)
Accession : YP_008107650.1
Strain : Enterobacter sp. R4-368
Genome accession: NC_021500
Putative virulence/resistance : Virulence
Product : ATP synthase
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.14
Position : 1771822 - 1773189 bp
Length : 1368 bp
Strand : -
Note : involved in type III protein export during flagellum assembly; Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGACCACCCGGCTAAAAAAGTGGCTTGATGGCATTGACCTGCGCGAGCACAAAATGGCGGAACTGCCGCCGTTTCGCCG
CTATGGTCGGCTGACGCGTGCGACCGGTCTGGTGATGGAAGCTGTCGGTCTGAAATTGCCGATCGGCACGCTGTGCATTG
TCGAACGCGAGACCGAAACGGGCATTCAGCGCGTAGAGAGCGAAGTGGTGGGGTTCAATGCCGAAACCCTCTATTTGATG
CCGCTGGAAAACGTCGAAGGCGTACTGCCTGGCGCCAGAGTGTATGCCTTTGGTAACAACGTTAAAGGCAAACTGCTGCC
GCTGGGACCGGAATTGCTGGGGCGCGTGCTGGATGCCAGCGCGCGTCCGCTCGATGGCCTGCCGCCGCCGGGGTCGACCG
ATCGCGGGCCGCTGTTTACCGCGCCGTTTAACCCGCTGCAGCGCGATCCCATCAAAAACGTGCTCGACGTGGGTGTTCGC
GCGATCAATGGCTTACTGACCGTTGGCCGCGGCCAGCGTATGGGGCTGTTCGCCGGTTCCGGCGTCGGTAAAAGCGTACT
GCTGGGCATGATGGCGCGTTTCACCAAAGCGGATGTCATCGTCGTCGGGTTGATTGGCGAGCGTGGCCGTGAGGTGAAGG
ATTTTATCGAGAACATTCTCGGTAAAGAGGGGCTTAAACGTTCAGTCGTTATCGCCGCACCGGCGGATGTATCGCCGATT
CTGCGTATGCAGGGCGCGGTCTACTGCACGCGTATCGCCGAAGATTTTCGCGATCGCGGCCTCGATGTGCTGCTGATTAT
GGACTCCTTAACCCGTTACGCGATGGCGCAACGTGAAATTGCGCTCGCCATCGGTGAACCGCCCGCGACCAAAGGCTACC
CGCCTTCGGTTTTCGCCAAGCTGCCTGCGCTGGTGGAACGTGCCGGTAACGGCACCAAAGGCGGCGGTTCGATCACCGCG
TTTTATACCGTGTTGACGGAAGGGGATGATCAGCAGGATCCGATTGCCGACTCGGCGCGTGCGATCCTCGACGGTCATAT
TGTGCTCTCGCGCAGGCTGGCGGAATCGGGACACTACCCGGCGATTGATATCGAAGCCTCGATAAGCCGTGCGATGACCG
AGCTTATCGAACCGGCGCATTACAAAAAAGTGCAGCGTTTTAAACAGATGCTCTCCTCTTACCAGCGTAACCGCGATCTG
GTGAGCGTAGGCGCGTATGCGGCGGGCAGCGATCCGTTGCTGGATCAGGCGATTAGCCTGTACCCCAGCATGGAGCGTTA
TCTCCACCAGGGAATTCATGAATCCTGTGATTATCCGACCTCCTGCGCGGAGCTTTCCGCGCTGTTTCCGGATGCCGGGG
CGAACTAA

Protein sequence :
MTTRLKKWLDGIDLREHKMAELPPFRRYGRLTRATGLVMEAVGLKLPIGTLCIVERETETGIQRVESEVVGFNAETLYLM
PLENVEGVLPGARVYAFGNNVKGKLLPLGPELLGRVLDASARPLDGLPPPGSTDRGPLFTAPFNPLQRDPIKNVLDVGVR
AINGLLTVGRGQRMGLFAGSGVGKSVLLGMMARFTKADVIVVGLIGERGREVKDFIENILGKEGLKRSVVIAAPADVSPI
LRMQGAVYCTRIAEDFRDRGLDVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGTKGGGSITA
FYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAESGHYPAIDIEASISRAMTELIEPAHYKKVQRFKQMLSSYQRNRDL
VSVGAYAAGSDPLLDQAISLYPSMERYLHQGIHESCDYPTSCAELSALFPDAGAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 6e-76 47
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 7e-78 47
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-79 46
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 7e-80 46
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 2e-81 45
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 2e-81 45
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-80 45
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-81 45
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 6e-81 45
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 3e-63 45
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-78 44
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-78 44
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 6e-63 44
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 8e-63 44
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 3e-63 44
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-63 44
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-63 44
unnamed AAL06369.1 EscN Virulence LEE Protein 3e-66 44
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 6e-64 42
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 2e-66 42
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 9e-67 42
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 4e-66 42
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-69 42
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-69 42
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 1e-73 42
escN AAL57542.1 EscN Virulence LEE Protein 5e-68 42
escN CAC81862.1 EscN protein Virulence LEE II Protein 4e-68 42
escN NP_290268.1 hypothetical protein Virulence LEE Protein 1e-67 42
escN AAC31513.1 L0034 Virulence LEE Protein 9e-68 42
ECs4568 NP_312595.1 EscN Virulence LEE Protein 1e-67 42
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 9e-68 42
escN YP_003223475.1 translocator EscN Virulence LEE Protein 7e-68 42
escN AAC38383.1 EscN Virulence LEE Protein 6e-68 42
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 4e-68 42
escN YP_003236088.1 translocator EscN Virulence LEE Protein 4e-68 42
escN CAI43874.1 EscN protein Virulence LEE Protein 5e-68 42
escN AAK26715.1 EscN Virulence LEE Protein 5e-68 42
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 6e-68 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_008107650.1 ATP synthase VFG2331 Protein 3e-154 78
fliI YP_008107650.1 ATP synthase VFG2499 Protein 8e-141 67
fliI YP_008107650.1 ATP synthase VFG1254 Protein 4e-124 63
fliI YP_008107650.1 ATP synthase VFG0192 Protein 2e-83 47
fliI YP_008107650.1 ATP synthase VFG2144 Protein 2e-83 46
fliI YP_008107650.1 ATP synthase VFG0390 Protein 1e-75 45
fliI YP_008107650.1 ATP synthase VFG0048 Protein 4e-74 44
fliI YP_008107650.1 ATP synthase VFG0515 Protein 3e-63 44
fliI YP_008107650.1 ATP synthase VFG0730 Protein 4e-68 42
fliI YP_008107650.1 ATP synthase VFG0812 Protein 5e-68 42