Gene Information

Name : H650_09085 (H650_09085)
Accession : YP_008107643.1
Strain : Enterobacter sp. R4-368
Genome accession: NC_021500
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1766864 - 1767625 bp
Length : 762 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGAAACGCAACACGCGCCTGCTGCCGGGACTGTTTGGCTTTGGGATCACGCTTGCCGGGATTTTCTTCCCCGCCGGTCT
GAGCTGGGCGGCCAGTACCGACATCATGCTTAGCCATTCGGCGAATGGCGAGAGCTGGTCACTGCCGGTACAAACGCTGG
TTTTGATGACATCGCTGACGTTTTTGCCCGCGATATTGCTGATGATGACGGGTTTTACCCGCATTGTGATTGTGCTCGGG
CTGCTGCGAAACGCCCTTGGCACCGCCAGTACACCGCCTAACCAGGTGCTGCTGGGACTGGCGCTGTTTCTCACGTTTTT
CGTGATGTCGCCGGTATTGAACCGGGTTTACGACGAAGCGTGGGTGCCGCTCTCGCAGGACAAGATTTCTATGGAAGTCG
CGTTGCAAAAAGGGTCGCAACCCTTGCGCGCCTTCATGCTTAAACAGACCCGCGAAGGGGATCTGGCGCTCTTTTCCCGC
ATCGCCAAAGCGGAGCAGTTTAATACCGCCGACGATGTGCCGATGAGCATTCTGGTTCCTGCGTTTGTGACCAGCGAACT
GAAAACCGGTTTCCAGATCGGCTTTACGATGTTTATTCCTTTTTTGATTATCGACCTGGTAGTGGCAAGTGTGCTGATGG
CGCTGGGGATGATGATGGTGCCTCCGGCAACGATTTCCCTGCCTTTTAAGCTGATGCTGTTTGTACTGGTGGATGGCTGG
CAGCTGGTTATCGGCTCCCTGGCGCAGAGCTTTTTTAGTTAG

Protein sequence : 
MKRNTRLLPGLFGFGITLAGIFFPAGLSWAASTDIMLSHSANGESWSLPVQTLVLMTSLTFLPAILLMMTGFTRIVIVLG
LLRNALGTASTPPNQVLLGLALFLTFFVMSPVLNRVYDEAWVPLSQDKISMEVALQKGSQPLRAFMLKQTREGDLALFSR
IAKAEQFNTADDVPMSILVPAFVTSELKTGFQIGFTMFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGW
QLVIGSLAQSFFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 1e-26 42
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 1e-26 42
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 1e-26 42
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 6e-32 42
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 1e-32 42
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 9e-33 42
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 1e-32 42
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 1e-32 42
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 1e-21 42
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 1e-21 42
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 4e-32 42
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-30 42
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-30 42
hrcR ABQ88359.1 HrcR Virulence Hrp PAI Protein 2e-20 41
hrpW AAB05075.1 HrpW Virulence Hrp PAI Protein 2e-20 41
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 2e-31 41
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 6e-33 41
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 6e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H650_09085 YP_008107643.1 flagellar biosynthesis protein FliP VFG2338 Protein 6e-80 77
H650_09085 YP_008107643.1 flagellar biosynthesis protein FliP VFG2494 Protein 1e-73 72
H650_09085 YP_008107643.1 flagellar biosynthesis protein FliP VFG1259 Protein 2e-62 59
H650_09085 YP_008107643.1 flagellar biosynthesis protein FliP VFG2016 Protein 4e-59 57
H650_09085 YP_008107643.1 flagellar biosynthesis protein FliP VFG0188 Protein 1e-31 43
H650_09085 YP_008107643.1 flagellar biosynthesis protein FliP VFG0044 Protein 1e-34 42
H650_09085 YP_008107643.1 flagellar biosynthesis protein FliP VFG0394 Protein 2e-30 41