Gene Information

Name : hdhA (PCA10_07720)
Accession : YP_008101109.1
Strain : Pseudomonas resinovorans NBRC 106553
Genome accession: NC_021499
Putative virulence/resistance : Virulence
Product : hydrazone dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 826577 - 828097 bp
Length : 1521 bp
Strand : -
Note : -

DNA sequence :
ATGCGTTACGCCCAACCCGGTACCCCCGGCGCTGTCGTTTCCTTCAAGTCCCGCTACGGCAACTTCATCGGCGGCGACTT
CGTCGCACCGGTCAAGGGCCAGTACTTCACCAATACCTCGCCGGTGAATGGCCAGCCGATCGCCGAATTCCCCCGCTCCA
CTGCCGAAGACATCGACAAGGCCCTGGATGCCGCCCATGCCGCCGCCGATGCCTGGGGCAAGACCTCGGTGCAGGACCGC
TCCAACGTCCTGCTGAGGATCGCCGACCGCATCGAGCAGAACCTGGAAGTGCTGGCCGTCACCGAGACCTGGGACAACGG
CAAGCCGGTACGCGAAACCCTCAACGCCGACATCCCGCTGGCCGTCGACCACTTCCGCTACTTCGCCGGCTGCATCCGCG
CCCAGGAAGGCGGCGCCGCCGAAATCAACGAGAACACCGTCGCCTACCACATCCATGAACCCCTGGGCGTGGTCGGGCAG
ATCATCCCGTGGAACTTCCCGCTGCTGATGGCCGCCTGGAAACTCGCCCCGGCCCTGGCCGCCGGCAACTGCGTGGTGCT
GAAACCGGCCGAGCAGACCCCGCTGGGCATCACCGTGCTGATGGAACTGATCGGCGACCTGCTGCCGCCCGGCGTGCTCA
ACGTGGTGCAAGGCTTCGGCAAGGAAGCGGGCGAGGCCCTGGCCACCAGCAAGCGCATCGCCAAGATCGCCTTCACCGGC
TCCACCCCGGTGGGCTCGCACATCCTCAAGTGCGCCGCCGAGAACATCATCCCCTCCACCGTGGAGCTGGGTGGCAAGAG
CCCGAACATCTACTTCGAGGACATCATGTCCGCCGAGCCGGCCTTCATCGAGAAGGCCGCCGAAGGCCTGGTGCTGGCCT
TCTTCAACCAGGGCGAGGTATGCACCTGCCCGTCCCGCGCGCTGGTGCAGGAATCCATCTACCCGGCGTTCATGGCCGAG
GTGATGAAGAAGGTCAACGCCATCAAGCGCGGCGACCCGCTGGACACCGACACCATGGTCGGCGCCCAGGCTTCCCAGCA
GCAGTTCGAGAAGATACTCTCCTACCTCGACATCGCCCAGAAGGAAGGCGCGGAAGTGCTCACCGGCGGCGCCGTGGAGA
AGCTGGAGGGCAGCCTGGCCACCGGTTACTACATCCAGCCGACCCTGCTCAAGGGCAACAACAAGATGCGCGTGTTCCAG
GAAGAGATCTTCGGCCCGGTGGTGGGCGTCACCACCTTCAAGGACGAGGCCGAGGCCCTGGCGATCGCCAACGACACCGA
GTTCGGCCTCGGCGCCGGCCTCTGGACCCGCGACATCAACCGCGCCTACCGCATGGGTCGCGGCATCAAGGCCGGCCGCG
TGTGGACCAACTGCTACCACCTGTACCCGGCCCACGCCGCGTTCGGTGGCTACAAGAAATCCGGCGTCGGCCGTGAAACC
CACAAGATGATGCTCGACCACTACCAGCAGACCAAGAACCTGCTGGTGAGCTACGACATCAACCCGCTGGGCTTCTTCTG
A

Protein sequence :
MRYAQPGTPGAVVSFKSRYGNFIGGDFVAPVKGQYFTNTSPVNGQPIAEFPRSTAEDIDKALDAAHAAADAWGKTSVQDR
SNVLLRIADRIEQNLEVLAVTETWDNGKPVRETLNADIPLAVDHFRYFAGCIRAQEGGAAEINENTVAYHIHEPLGVVGQ
IIPWNFPLLMAAWKLAPALAAGNCVVLKPAEQTPLGITVLMELIGDLLPPGVLNVVQGFGKEAGEALATSKRIAKIAFTG
STPVGSHILKCAAENIIPSTVELGGKSPNIYFEDIMSAEPAFIEKAAEGLVLAFFNQGEVCTCPSRALVQESIYPAFMAE
VMKKVNAIKRGDPLDTDTMVGAQASQQQFEKILSYLDIAQKEGAEVLTGGAVEKLEGSLATGYYIQPTLLKGNNKMRVFQ
EEIFGPVVGVTTFKDEAEALAIANDTEFGLGAGLWTRDINRAYRMGRGIKAGRVWTNCYHLYPAHAAFGGYKKSGVGRET
HKMMLDHYQQTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-151 67
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-158 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-158 65
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-158 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-157 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hdhA YP_008101109.1 hydrazone dehydrogenase VFG0082 Protein 9e-152 67