Gene Information

Name : PCA10_55210 (PCA10_55210)
Accession : YP_008105858.1
Strain : Pseudomonas resinovorans NBRC 106553
Genome accession: NC_021499
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6143980 - 6144654 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCATTCGTAATTGGCCTGCGGCGGAGCGCCCGCGGGAGAAACTTCTCGAGCTGGGGGCGGCGGCCCTTTCCGACGC
CGAACTCCTCGCCATTTTCCTGCGCACGGGGGTGGCCGGCCGCAGTGCCGTCGACCTCGCCCGCCACCTGCTCAACGACT
TCGGCAGCCTGCGCGCACTGCTGGAGGCCGAGTTGCCGGAGTTCAGCCGGCACCTCGGTCTGGGCCCCGCCAAGTTCGCG
CAATTGCAGGCGGTGCTGGAAATGGCCCGTCGTCATCTCGCCGAGACGCTGCGCCGCGATTCCGCGCTGGAAAGCCCTCA
GGCGGTGCGGGATTTCCTCAAGGCGCAGCTGCGCCATTCCGAGCACGAGCAGTTCGCCTGCCTGTTCCTCGATGCCAAGC
ACCGGGTGCTGGCCTTCGAGGTGCTGTTCCAGGGCACCATCGACAGCGCCAGCGTCTATCCGCGCCAGGTGGTCAAGCGC
ACCCTGGCGCACAATGCGGCGGCGCTGATCCTCAGCCACAACCATCCTTCGGGTGTCGCCGAACCGAGCGAGGCCGATCG
CCAGCTGACCCGGCGCCTCAAGGAGGCGCTGGCGCTGATCGACGTGCGGGTGCTCGACCATTTCATCGTCGGCGACGGTG
AACCCTTGTCCATGGCCGAGCGCGGCTGGATCTAG

Protein sequence : 
MSIRNWPAAERPREKLLELGAAALSDAELLAIFLRTGVAGRSAVDLARHLLNDFGSLRALLEAELPEFSRHLGLGPAKFA
QLQAVLEMARRHLAETLRRDSALESPQAVRDFLKAQLRHSEHEQFACLFLDAKHRVLAFEVLFQGTIDSASVYPRQVVKR
TLAHNAAALILSHNHPSGVAEPSEADRQLTRRLKEALALIDVRVLDHFIVGDGEPLSMAERGWI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1786 NP_231421.1 DNA repair protein RadC Not tested VPI-2 Protein 5e-31 48
VC0395_A1383 YP_001217326.1 DNA repair protein RadC Not tested VPI-2 Protein 5e-31 48
VPI2_0034 ACA01849.1 DNA repair protein RadC Not tested VPI-2 Protein 4e-31 47
VC0510 NP_230161.1 DNA repair protein RadC-like protein Not tested VSP-2 Protein 1e-29 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCA10_55210 YP_008105858.1 hypothetical protein VFG1119 Protein 2e-31 48