Gene Information

Name : PCA10_54200 (PCA10_54200)
Accession : YP_008105757.1
Strain : Pseudomonas resinovorans NBRC 106553
Genome accession: NC_021499
Putative virulence/resistance : Unknown
Product : putative RNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6036536 - 6038854 bp
Length : 2319 bp
Strand : +
Note : -

DNA sequence :
ATGGATAGCATCAACAACCGCATCGCCGAAGAACTGGGCGTGCGCCCGCAACAGGTCGCCGCCGCCGTGGCGCTGCTGGA
CGAAGGTTCCACCGTGCCCTTCATCGCCCGCTACCGGAAGGAAGTCACCGGCAGCCTCGACGACACCCAGCTGCGCAACC
TGGAAGAGCGCCTGCGCTACCTGCGCGAGATGGAAGACCGTCGTACCGCGATCCTCTCCAGCATCACCGAACAGGGCAAG
CTGACCCCGGAGCTGGAGCGCGAGATCAAGCTGGCCGACACCAAGACCCGCCTGGAAGACCTCTACCTGCCCTACAAGCA
GAAGCGCCGCACCAAGGGCCAGATCGCCCTGGAAGCGGGCCTCGGCGAACTGGCCGACGCGCTGTTCAACGACCCGAACC
TCGCCCCCGAGGCGGAAGCCGAACGCTTCGTCGATGCCGAAAAGGGCTTCGCCGACGTCAAGGCGGTGCTGGAAGGCGCC
AAGTACATCCTCATGGAGCGTTTCGCCGAAGACGCCACCCTGCTCGCCAACCTGCGCGGCTTCCTCAAGGACAACGCCAC
CCTCAGCGCCCGCCTGGTGGCCGGCAAGGAACAGGAAGGCGCCAAGTTCAGCGACTACTTCGAGCATGACGAGAACCTCA
AGGGCGTACCCTCGCACCGCGCCCTGGCGATCTTCCGCGGCCGCAACGAAGGCATCCTGAGCGCCGCCCTGAAGGTCGGC
GAAGAGCTGCCGGGCACCATGCATCCCTGCGAAGTGATGATCGGCGAGCGCTTCGGCATCGCCAACCAGGGCCGTGCCGC
CGACAAGTGGCTGGGCGAGGTGGTGCGCTGGACCTGGAAGGTCAAGCTCTACACCCACCTGGAAACCGACCTGCTCGGTG
AGCTGCGCGAAGCCGCCGAAGGCGAGGCGATCAACGTCTTCGCCCGCAACCTGCACGACCTGCTGCTGGCCGCGCCGGCC
GGCCCGCGCGCCACCCTGGGCCTCGACCCGGGCCTGCGCACCGGCTGCAAGGTGGCCGTGGTCGACGCCACCGGCAAGCT
GCTGGACACCGCCACCGTCTACCCCCACGTGCCGCACAACAAGTGGGACGAGACCCTGGCCAGCCTCGGCAAGCTCTGCG
CCAAGCACAACGTCGACCTGATCGCCATCGGCAACGGCACCGCCAGCCGCGAGACCGACAAGCTGGCCATCGAGCTGATC
AAGAAATACCCGGCCCAGAAGATGACCAAGATCATGGTCAGCGAGGCCGGCGCCTCGGTGTACTCGGCCTCCGAGCTGGC
GGCGAAGGAATTCCCGGACCTGGACGTCTCCCTGCGTGGCGCCGTGTCCATCGCCCGCCGCCTGCAGGACCCGCTGGCCG
AGCTGGTGAAGATCGACCCGAAATCCATCGGCGTCGGCCAGTACCAGCACGACGTCTCCCAGCTGCAGCTGGCGCGCAGC
CTGGACGCCGTGGTGGAGGACTGCGTGAACGCCGTGGGCGTGGACGTGAACACCGCCTCCGCCGCCCTGCTGGCGCGCAT
CTCCGGCCTCAACGCGACCCTGGCGCAGAACATCGTCGCCTACCGCGACGCCAACGGCGCCTTCAAGACCCGTAACGAGC
TGAAGAAAGTCAGCCGCCTGGGCGAGAAGACCTTCGAGCAGGCCGCCGGCTTCCTCCGCGTGATGAGCGGCGAGAACCCG
CTGGACGCTTCCGCCGTGCACCCGGAAACCTACCCGCTGGTGCAGCGCATCGCCGAAGGAACCGGCCGCGACATCCGCTC
GCTGATCGGCGACTCGGGCTTCCTCAAGCGCCTGGACCCGGCCAAGTTCACCGACGAAACCTTCGGCCTTCCCACCGTCA
CCGACATCCTCAAGGAACTGGACAAGCCGGCCCGCGACCCGCGCCCGGAGTTCAAGACCGCCGAGTTCCAGGACGGCGTG
GAAAGCCTCAAGGACCTCAAGCCCGGCATGGTGCTGGAAGGCGTGGTGACCAACGTCACCAACTTCGGTGCGTTCGTCGA
CATCGGTGTCCACCAGGACGGCCTGGTGCACATCTCCGCGCTGTCGGAGAAGTTCGTCAAGGACCCCTATGAAGTGGTCA
AGGCCGGCGACATCGTCAAGGTCAAGGTCATGGAAGTGGACATCCCGCGTAACCGCGTCGGCCTGTCCATGCGCATGAGC
GACACCCCCGGCGAGAAGACCGAAGGCCCGCGCGGCAGCGCCTCCCGCCAGGGCGGCCAGGCTCGCCAGCAACAGAGCGC
CCCGCGCCACAGTGCGCCGCCGGCCAACGCCGCCATGGCCTCGCTCTTCGCCAACGCCAAGCAGATCAAGAAGAAATGA

Protein sequence :
MDSINNRIAEELGVRPQQVAAAVALLDEGSTVPFIARYRKEVTGSLDDTQLRNLEERLRYLREMEDRRTAILSSITEQGK
LTPELEREIKLADTKTRLEDLYLPYKQKRRTKGQIALEAGLGELADALFNDPNLAPEAEAERFVDAEKGFADVKAVLEGA
KYILMERFAEDATLLANLRGFLKDNATLSARLVAGKEQEGAKFSDYFEHDENLKGVPSHRALAIFRGRNEGILSAALKVG
EELPGTMHPCEVMIGERFGIANQGRAADKWLGEVVRWTWKVKLYTHLETDLLGELREAAEGEAINVFARNLHDLLLAAPA
GPRATLGLDPGLRTGCKVAVVDATGKLLDTATVYPHVPHNKWDETLASLGKLCAKHNVDLIAIGNGTASRETDKLAIELI
KKYPAQKMTKIMVSEAGASVYSASELAAKEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLQLARS
LDAVVEDCVNAVGVDVNTASAALLARISGLNATLAQNIVAYRDANGAFKTRNELKKVSRLGEKTFEQAAGFLRVMSGENP
LDASAVHPETYPLVQRIAEGTGRDIRSLIGDSGFLKRLDPAKFTDETFGLPTVTDILKELDKPARDPRPEFKTAEFQDGV
ESLKDLKPGMVLEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFVKDPYEVVKAGDIVKVKVMEVDIPRNRVGLSMRMS
DTPGEKTEGPRGSASRQGGQARQQQSAPRHSAPPANAAMASLFANAKQIKKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 64