Gene Information

Name : dnaB (PCA10_51680)
Accession : YP_008105505.1
Strain : Pseudomonas resinovorans NBRC 106553
Genome accession: NC_021499
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.4.12
Position : 5728020 - 5729414 bp
Length : 1395 bp
Strand : -
Note : -

DNA sequence :
ATGAACGAAATCACCGTCCCGGAACAGTTCGACCTGCAGACTGCCGCCCTCAAGGTGCCGCCGCACTCCGTCGAGGCCGA
GCAGGCCGTCCTCGGTGGCCTGATGCTGGACAACAACGCCTGGGAGCGAGTGCTCGACCAGGTGTCCGACGGCGACTTCT
ATCGCCATGATCATCGACTGATCTTCCGCGCCATCTACAAGCTCGCCGAGCGCAACATGCCCTTCGACGTGGTCACCCTG
TCCGAACAGTTGGACAAGGAAGGCCAGTTGCCACAGGTCGGCGGCCTGGCCTATCTCGGCGAACTGGCGAAGAACACCCC
GTCCGTGGCCAACATCAAGGCCTACGCCCAGATCATTCGCGAGCGAGCGACCCTGCGTCAGCTGATCAGCATCAGCAGCG
GGATCGCCGACAGCGCCTACGCGCCCCAGGGGCGGACCGGCGAAGAGATCCTCGACGAAGCCGAGCGGCTGATCTTCCAG
ATCGCCGAGGCGCGGCCCAAGACCGGCGGCCCGGTCGGCATCAACGACATCCTGGTCAAGGCCATCGACCGTATCGACGA
GCTGTTCAACAACGGCGACGCCATCACCGGCCTGTCCACCGGCTTCAACGACCTGGACAACCTGACCAGCGGCCTGCAAC
CCGCCGACATGATCATCGTCGCCGGCCGTCCGTCCATGGGTAAGACCACCTTCGCCATGAACCTGGTGGAAAACGCCCTG
ATGCGCAGCGACAAGGCGATCCTGGTGTATTCCCTGGAGATGCCCTCCGAATCCATCGTGATTCGTATGCTCGCGTCCCT
CGGCCGCATCGACCAGACCAAGGTGCGTGCCGGCCGCCTGGACGACGACGACTGGCCGCGCCTGACCTCTGCGGTCAACC
TGCTCAACGACCGCAAGCTGTTCATCGACGATACCGCCGGCATCTCGCCTTCCGAGATGCGCGCCCGTACCCGTCGCCTG
GCCCGTGAGCACGGCGAGATCGGCCTGATCATGGTCGACTACCTGCAGCTGATGCAGATCCCGGGTTCCAGTGGCGACAG
CCGGGTGAACGAGATCTCCGAGATCTCGCGCTCCCTCAAGGCCCTGGCCAAGGAATTCAACTGCCCGGTGATCGCGCTGT
CGCAGCTGAACCGGGGCCTCGAACAGCGCCCGAACAAGCGCCCGATCAACTCCGACTTGCGTGAATCCGGAGCGATCGAG
CAGGACGCCGACATCATCCTGTTCGTCTACCGCGACGAGGTCTACCACCCCGAGACCGAGTTCAAGGGTGTGGCCGAGAT
CATCATCGGCAAGCAGCGTAACGGTCCCCTGGGCACCGCGCGCCTGGCCTTCCTGGGAAAGTACTCGCGCTTCGAGAACC
TGGCGCCGGGCGCCTACAACTTCGAAGACGAATAA

Protein sequence :
MNEITVPEQFDLQTAALKVPPHSVEAEQAVLGGLMLDNNAWERVLDQVSDGDFYRHDHRLIFRAIYKLAERNMPFDVVTL
SEQLDKEGQLPQVGGLAYLGELAKNTPSVANIKAYAQIIRERATLRQLISISSGIADSAYAPQGRTGEEILDEAERLIFQ
IAEARPKTGGPVGINDILVKAIDRIDELFNNGDAITGLSTGFNDLDNLTSGLQPADMIIVAGRPSMGKTTFAMNLVENAL
MRSDKAILVYSLEMPSESIVIRMLASLGRIDQTKVRAGRLDDDDWPRLTSAVNLLNDRKLFIDDTAGISPSEMRARTRRL
AREHGEIGLIMVDYLQLMQIPGSSGDSRVNEISEISRSLKALAKEFNCPVIALSQLNRGLEQRPNKRPINSDLRESGAIE
QDADIILFVYRDEVYHPETEFKGVAEIIIGKQRNGPLGTARLAFLGKYSRFENLAPGAYNFEDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 3e-120 58
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 3e-107 55
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 1e-100 50
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 4e-101 50
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 5e-100 49
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 2e-96 48
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 7e-81 44
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 4e-91 44
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 4e-91 44