Gene Information

Name : PCA10_50040 (PCA10_50040)
Accession : YP_008105341.1
Strain : Pseudomonas resinovorans NBRC 106553
Genome accession: NC_021499
Putative virulence/resistance : Virulence
Product : putative general secretory pathway protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5542654 - 5543079 bp
Length : 426 bp
Strand : +
Note : -

DNA sequence : 
ATGAACATGCGTCGTCGTCGACCCGAACAAGGCTTCACCCTGCTCGAACTCCTGGTGGTGCTGGTGGTGCTCGGCCTGTT
GGCCGGCATTGTGGCGCCGAAGTATTTCAATCAGCTGGGCCGCTCCGAGACCAAGGTGGCCCGCGCGCAGATCGAGGGGT
TGGTGAAGGCCCTGGACATCTATCGCCTGGAGGTGGGCCGCTACCCCAGCAGCGAGCAAGGCCTGACCGCGCTGGTGGCC
GCGCCGCCGGACGAGCCGCGCTGGTCCGGCCCCTACCTGCAGAAGGACGTGCCCCAGGACCCCTGGGGCCGCGCCTATGT
CTACCGCTCCCCCGGCGAGAACGGCGATTTCGACCTGCTCACCCTGGGCAAGGACGGCCAGCCCGGCGGTGACGGCGAGA
ACGCCGAAGTCACCAGCTGGCAGTGA

Protein sequence : 
MNMRRRRPEQGFTLLELLVVLVVLGLLAGIVAPKYFNQLGRSETKVARAQIEGLVKALDIYRLEVGRYPSSEQGLTALVA
APPDEPRWSGPYLQKDVPQDPWGRAYVYRSPGENGDFDLLTLGKDGQPGGDGENAEVTSWQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 2e-21 46
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-21 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCA10_50040 YP_008105341.1 putative general secretory pathway protein VFG2050 Protein 7e-22 46
PCA10_50040 YP_008105341.1 putative general secretory pathway protein VFG1871 Protein 1e-19 45
PCA10_50040 YP_008105341.1 putative general secretory pathway protein VFG0180 Protein 2e-20 43