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Name : hsdM (PCA10_49510) Accession : YP_008105288.1 Strain : Pseudomonas resinovorans NBRC 106553 Genome accession: NC_021499 Putative virulence/resistance : Unknown Product : type I restriction-modification system DNA methylase Function : - COG functional category : - COG ID : - EC number : 2.1.1.- Position : 5471184 - 5472797 bp Length : 1614 bp Strand : - Note : - DNA sequence : ATGGCACTGAACGACACGAGCAAGAACGGCAATGGGGGCAACCTCGGCTTCGAGGCCGAACTCTTCAAGGCCGCCGACAA GCTGCGCGGCAACATGGAGCCGTCTGACTACAAGCACGTCGCGCTCGGCCTCATTTTCCTGAAGTACATCTCCGACGCCT TCGAGGCCAAGCGTAAAGCACTTTTGGCTGAAGACGCGCAAGCGGCTGAGGACAAGGATGAATACCTCGCAGACAACGTG TTCTGGGTGCCGAAAGAGGCGCGTTGGTCGCACTTGCAGGCCAATGCCAAGCTGCCCACCATCGGCACCTTGATCGATGA TGCGATGCGCTCCATCGAGAAGGACAACGAATCGCTCAAGGGCGTATTGCCCAAAGACTACGCCCGCCCCGCGTTAAACA AGGTGATGCTGGGCGAGCTGATCGACCTGATCTCCGGTATTGCGCTCAACGAGGAAGGCGACCGCTCCAAGGACATCCTC GGGCGCGTGTACGAGTATTTCCTGGGTCAGTTCGCCGGAGCCGAAGGCAAGCGCGGCGGAGAGTTCTACACCCCGCGTTC CGTGGTGCGCGTGCTGGTCGAGATGCTCGAACCGCTGCCTGATCCCGCGCGGGGCGTGGCAGGCCGTGTCTACGACCCCT GCTGCGGCTCGGGCGGCATGTTCGTGCAGTCGGAGAAATTCGTGCAGGAGCACGGAGGCCGTATTGGCGACATCGCCATC TACGGCCAGGAATCGAACTACGTAACTTGGCGCCTGGCCAAGATGAACCTTGCAGTGCGTGGTATTGATTCCAAGATTTT CTGGAACAACGAAGGCAGCTTTCACAAGGACGAGTTTGCAGCTCAACGCGGTGGTGACGGCGCTCCAATGAAAGCGGACT TCATCCTCGCCAACCCGCCGTTCAATATTTCAGATTGGGGCGGCGACCGTTTGCGTGAAGATGTGCGCTGGAAGTTCGGC GTGCCGCCGGTGGGCAATGCCAACTACGCGTGGCTGCAGCACATCTACCACCATCTTGCGCCCAATGGCACTGCGGGTGT GGTGCTGGCCAACGGCTCGATGAGCTCGAACCAGTCCGGCGAGGGCGAGATCCGCAAGGCCATGATTGAAGCTGACGCGG TGGATTGCATGGTGGCGCTGCCCGGGCAGCTCTTCTACTCCACGCAGATCCCCGCCTGTCTGTGGTTCCTGGCCCGCAAC AAGAACCCCGCCAGTGGCAAAGCCGGTGGTTTGCGCGACCGTCGCGGGCAGGTGCTGTTCATCGACGCCCGCAAACTGGG TGTGCTTGTGGATCGTACTCGGCGCGAACTCACGGACGAGGAAATACAGAGGATTGCGGACACCTACCATGCCTGGCGCG GGGAAGAGGGCGCGGGTGAATACGCCGACGTGGCGGGCTTCTGCAAGTCAGCATCAATCGAGGACATCCGCAAGTACGGC CATGTGCTGACGCCGGGGCGCTACGTGGGCGCGGCCGAACAGGAAGACGATGGCGAACCCTTCGATGAAAAGATGCTGCG ACTCTCCGCGCAGTGGCGCGAGCACCGGGCGGCGGCCGCCAAGCTGGATACGGCGATTGAGGCCAACCTGAAGGAGCTTG GGTATGGCGAATGA Protein sequence : MALNDTSKNGNGGNLGFEAELFKAADKLRGNMEPSDYKHVALGLIFLKYISDAFEAKRKALLAEDAQAAEDKDEYLADNV FWVPKEARWSHLQANAKLPTIGTLIDDAMRSIEKDNESLKGVLPKDYARPALNKVMLGELIDLISGIALNEEGDRSKDIL GRVYEYFLGQFAGAEGKRGGEFYTPRSVVRVLVEMLEPLPDPARGVAGRVYDPCCGSGGMFVQSEKFVQEHGGRIGDIAI YGQESNYVTWRLAKMNLAVRGIDSKIFWNNEGSFHKDEFAAQRGGDGAPMKADFILANPPFNISDWGGDRLREDVRWKFG VPPVGNANYAWLQHIYHHLAPNGTAGVVLANGSMSSNQSGEGEIRKAMIEADAVDCMVALPGQLFYSTQIPACLWFLARN KNPASGKAGGLRDRRGQVLFIDARKLGVLVDRTRRELTDEEIQRIADTYHAWRGEEGAGEYADVAGFCKSASIEDIRKYG HVLTPGRYVGAAEQEDDGEPFDEKMLRLSAQWREHRAAAAKLDTAIEANLKELGYGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 2e-146 | 58 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 7e-146 | 57 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 7e-146 | 57 |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 2e-115 | 47 |
