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Name : hsdR (PCA10_49480) Accession : YP_008105285.1 Strain : Pseudomonas resinovorans NBRC 106553 Genome accession: NC_021499 Putative virulence/resistance : Unknown Product : type I restriction-modification system restriction subunit Function : - COG functional category : - COG ID : - EC number : 3.1.21.3 Position : 5465977 - 5469108 bp Length : 3132 bp Strand : - Note : - DNA sequence : ATGGCGTTTCTGTCGGAGGCCGCTGTGGAGCAAGCGCTGCTGGATCAGCTGCGCGCTCTCGATTACAGCATCGAACGTGA GGAGGACATTGGCCCTGATGGACACCGACCAGAGCGCGAGAGTCATGATGAAGTCGTGCTCAAGAAACGGTTCGAGGACG CAGTTGCTCGCCTGAACCCTGGCCTGCCATTGGAGGCCCGGCAGGATGCCGTGCGTCGCGTGATGCAGTCCGAATTGCCC TCATTGCTCGAAGAGAACCGCCGCATCCACAAGCTGATGACCGAAGGCGTGGACGTCGAGTACTACGCCGACGACGGCAC GCTGGCCGCTGGCAAGGTTGTGCTCATCGACTTCGAGCACCCGGGGCAGAACGATTGGTTGGCGGTAAGCCAGTTCGTGG TGATCAACGGCCAGAACAACCGACGGCCCGACGTGGTGGTGTTCGTGAACGGCTTGCCGCTTGGCGTGATCGAGCTGAAA GCACCGGGCAGCGCCGGGGCGCATCTACTGGGCGCGTTCAATCAACTACAGACTTACAAGAAGCAGATTCCGGCGCTGTT CAACACCAACGTACTGCTGGTGACGTCGGACGGTATTGCGGCTCGGGTGGGGTCGCTGTCGGCAGACCTTGAACGCTTCA TGCCTTGGCGCACCACCGACGGCACGGCCGTTGCCCCGAAGGGCGCGCCGGAACTTTCGACACTGATTGAGGGCGTGTTC GAGCATCGCCGCCTGCTTGATGTGCTCTGTCACTTCACGGTCTTCGGCGAAACCGGTTCGGGCTTAGCCAAGATCATCGC GGGATACCACCAGTTCCACGCGGTGCGACACGCGGTCAACAGCACGGTGACGGCTTCTTCGCCGGAGGGCAATCAACGAG TCGGGGTCATCTGGCACACCCAGGGGTCCGGCAAAAGCCTGTTGATGGCGTTCTATGCCGGACAGCTCGTCAAACACCCA GAAATGGCCAACCCCACGCTGGTGGTGCTGACCGACCGGAACGACCTCGACGACCAGCTCTTCTCGACCTTTTCGATGTG CCGCGACCTGATCCGGCAGACGCCAGTACAGGCCGAGAGCCGCGAAGATCTGCAGAAGGTCTTGAACAGGGCGTCGGGCG GTGTGATTTTCACGACCTTGCAGAAGTTTGGCGAGATCGATGAGCCACTCACCAGGCGACGCAATGTGGTCGTCATCGCG GATGAAGCGCACCGCAGTCAATACGGCTTCAAGGCCAAGGTGGACGCGAAGACGGGCGAAATCTCCTACGGCTTCGCCAA GTACATGCGCGACGCTCTGCCGAAAGCCTCCTTCATCGGCTTTACCGGCACCCCCATCGAGGCGGACGACGTCAACACTC CGCAGGTATTCGGCGATTACATCGATGTCTATGACATTAGCCGTGCGGTCGAAGACGGCGCGACCGTGCCGATTTACTAC GAGTCGCGGCTGGCACGTATCGAACTCGACGAGGACGAGAAGCCCAAGATCGATGCAGAGGTTGACGACCTGACCGAGGA AGATTCCGAGGCGGACCAGGAGCGTTTCAAGAAGAAATGGTCAACGGTCGAAGCCCTGGTCGGCAGTGACAAGCGCCTGG CGCTGGTGGCCAGGGACATGGTCGCCCACTTCGAGGATCGCGTGGCTGCCCTCGACGGCAAAGCGATGGTGGTGTGCATG AGCCGCCGCATCTGCGTGAAGCTCTACGACGAAATCGTCAAGTTGCGCCCGGACTGGCACAGCGACGATGACAACGCTGG CGCGGTCAAGATCGTGATGACGGGGGCGGCGAGCGATCCGCAGGAGTGGCAGAAGCACATTGGCAACAAGGCGCGGCGCG ATCTGCTCGCCAAGCGCGCCCGCGACCCGAAGGACGCACTCAAACTGGTGATCGTGCGGGATATGTGGCTGACCGGCTTT GACGCACCTTGCATGCACACGATGTACGTGGACAAGCCGATGCAGGGGCACGGCCTGATGCAGGCGATTGCGCGGGTAAA CCGCGTGTTCCGCGATAAGCCTGCCGGGCTGATCGTGGACTACATCGGCATCGCGCAAAATCTAAAGTCGGCCCTGCAGC AGTACTCGAAGAACGATCAGGAAAACACTGGCGTCGACGAAGCGCAGGCCATCGCAGTGATGATGGAGAAGTTCGAAGTG GTACGGGATATGTACCACGGCTTCGACTACGTCTCTGCGCTGAAAGGAACGCCTCAGGAGCGCCTCGCGATGATGGCGGG AGCCATTGAGTGGATTCTCGACCTTCAGCAAAAGCTGGCGGAAAAGGAGACGACCAAGGAAGGCAAGAAGAACGCCCATC GACGATACCAGGACGCCGTGCTGGCACTTTCCAAAGCGTTCGCCTTGGCATCCGCTTCCGACGAGGCCCGAGACATTCGG GAGGAAGTCGGCTTCTTCCAGGCGATCCGTGCCGCGCTGGTCAAGAGCAGCACCGGTTCCGGAGTGACTCAGCAAGAGCG CGAGTTGGCGATCCAGCAGATTGTCAGCCGTGCGGTGGTTTCCACCGAGATCGTGGACATCCTGGCCGCGGCGGGCATCA AGAGTCCGGACATTTCCATCCTCTCCGACGAGTTTCTCGCCGAAGTTCAGCAGATGGAGAAGAAGAACCTTGCGTTGGAA GCGTTGCGCAAGCTGATCAACGACGGCATTCGCTCGCGTAGCAAGGCCAACGTGGTGCAGACCAAGGCATTCTCGGAGCG CCTGGAGGACGCCGTGGCGCGCTACCACGCCAATGCCATCACCACTGCTGAGGTGTTGCAGGAGCTGATCCAACTGGCCA AGGATATCCGCGCAGCCCGTCAGCGAGGCGAGGAGTCCGGGCTGTCCGATGAGGAGATCGCCTTCTACGACGCTTTGGCC GAGAACGAAAGTGCTGTGCAGATGATGGGCGACGACGCTCTTCGGCTGATCGCTCACGAGTTGCTTGTGAGCCTGCGTGA AAACGTATCGGTGGACTGGGCTCACCGCGACTCGGCACGAGCCCGGATGCGGGTACTGGTAAAGCGCATCTTGCGGAAGT ATGGCTTCCCACCTGATCTGCAGGACTCTGCCGTGCAAACGGTGCTGCAGCAGGCTGAGGCGCTGTCGTCGGGTTGGAGC GTTTCGAGATGA Protein sequence : MAFLSEAAVEQALLDQLRALDYSIEREEDIGPDGHRPERESHDEVVLKKRFEDAVARLNPGLPLEARQDAVRRVMQSELP SLLEENRRIHKLMTEGVDVEYYADDGTLAAGKVVLIDFEHPGQNDWLAVSQFVVINGQNNRRPDVVVFVNGLPLGVIELK APGSAGAHLLGAFNQLQTYKKQIPALFNTNVLLVTSDGIAARVGSLSADLERFMPWRTTDGTAVAPKGAPELSTLIEGVF EHRRLLDVLCHFTVFGETGSGLAKIIAGYHQFHAVRHAVNSTVTASSPEGNQRVGVIWHTQGSGKSLLMAFYAGQLVKHP EMANPTLVVLTDRNDLDDQLFSTFSMCRDLIRQTPVQAESREDLQKVLNRASGGVIFTTLQKFGEIDEPLTRRRNVVVIA DEAHRSQYGFKAKVDAKTGEISYGFAKYMRDALPKASFIGFTGTPIEADDVNTPQVFGDYIDVYDISRAVEDGATVPIYY ESRLARIELDEDEKPKIDAEVDDLTEEDSEADQERFKKKWSTVEALVGSDKRLALVARDMVAHFEDRVAALDGKAMVVCM SRRICVKLYDEIVKLRPDWHSDDDNAGAVKIVMTGAASDPQEWQKHIGNKARRDLLAKRARDPKDALKLVIVRDMWLTGF DAPCMHTMYVDKPMQGHGLMQAIARVNRVFRDKPAGLIVDYIGIAQNLKSALQQYSKNDQENTGVDEAQAIAVMMEKFEV VRDMYHGFDYVSALKGTPQERLAMMAGAIEWILDLQQKLAEKETTKEGKKNAHRRYQDAVLALSKAFALASASDEARDIR EEVGFFQAIRAALVKSSTGSGVTQQERELAIQQIVSRAVVSTEIVDILAAAGIKSPDISILSDEFLAEVQQMEKKNLALE ALRKLINDGIRSRSKANVVQTKAFSERLEDAVARYHANAITTAEVLQELIQLAKDIRAARQRGEESGLSDEEIAFYDALA ENESAVQMMGDDALRLIAHELLVSLRENVSVDWAHRDSARARMRVLVKRILRKYGFPPDLQDSAVQTVLQQAEALSSGWS VSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 48 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 47 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 47 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 47 |
