Gene Information

Name : PCA10_49420 (PCA10_49420)
Accession : YP_008105279.1
Strain : Pseudomonas resinovorans NBRC 106553
Genome accession: NC_021499
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5460623 - 5461864 bp
Length : 1242 bp
Strand : +
Note : -

DNA sequence :
ATGAAGCGCAGCGATATCAAGCGCCGCCCGCTGGCCGACACCGTGCTCGCCAGCCTGGACCCGGAAACTAAGGAATACCG
GGAACTGGACGGCGACGGCCTGTATTTCCGTGTAAAGCCTGATGGCTCGAAGTCCTGGCAGCTGCGGTACAAGAAGGCGG
ACGGAAAATGGTCTTGGCTGGGACTCGGCGGCTACGGAACGGGAGACCACCAGTTGACCGGCGAACAGGCTCGCCGCAAG
GTCCGCGAGCTGCGCGACAGTACAGCCAAAGACGGCAGCATCATGGCCACCAAGCGTGCCAGGAAGGCAGCGGAGCTCGA
AGCGGCCAACAATACCTTCGAGCATCTGGCCCGCGAGTGGTACGCAACCAAGTGCAAGACCTGGACGGAAGGAACGGCCG
TTCGCACCATCGGCGCGCTTGAGAAACATGTGTTCCCTGAGTTCGGCAAGCGGCCCTATACCGGCATTCTGCCGATGGAG
TGGATGGAATTCCTGCGCAGCATGGAGCAGACCGGCATCGTCGAACAAACCAGCCGCGTGCGTGGTATGTGCCGTGAGAT
ATACGACCTTGCCCGAGTCACCGGCCGCGCGACACACAACCCGCTCGAAGGGCTGCACAAGTTCCTGTTGACCAAGCCAG
TCGAAAACTTCGCCCATGTATCCCTTGAGGAGCTACCTGCACTGCTGCGGGCCATTCGCTCCTACCCCCATGCACCTGAT
GTTCGCATCGGCCTACAACTTCAGACGATGCTCGCCTGCCGCCCTTCCGAGCTGCGCGAAGCCAGCTGGGAGGAGTTCGA
CCTGGATGCTGGACTCTGGTTAATCCCTGCCGAACGAATGAAGCGTCGCCGAGAACATCTGGTGCCCCTGCCCAACCAAG
CCCTTGAACTATTGCGAGAGCTGCACAACATCACCGGCAGCTTCCCGCTTCTGTTCCCTGGCCGCGGCGACACTACCAAG
CCACGTAGCAATACCGTATTCCTCATGGCCCTGCGCCGCCTGGGCTACGAAGGTCGCCAGACGGGGCACGGCTTCCGTCA
CCTTGCCAGCACCATCCTCAACGAAAACGGCTTCGACTCACAGCATGTCGAGGCCCAGCTCTCCCACGTCAAGGAAGGTG
TCCGGGGCGTCTATGACAAGAGCACCTATCTGGATCAGCGCAAGGTGATGATGCAGTGGTATGCCGATCACCTGGACAAG
CTGGCCACAGGCAATGTGGTTCAGCTCAAGCGCAAGGCATGA

Protein sequence :
MKRSDIKRRPLADTVLASLDPETKEYRELDGDGLYFRVKPDGSKSWQLRYKKADGKWSWLGLGGYGTGDHQLTGEQARRK
VRELRDSTAKDGSIMATKRARKAAELEAANNTFEHLAREWYATKCKTWTEGTAVRTIGALEKHVFPEFGKRPYTGILPME
WMEFLRSMEQTGIVEQTSRVRGMCREIYDLARVTGRATHNPLEGLHKFLLTKPVENFAHVSLEELPALLRAIRSYPHAPD
VRIGLQLQTMLACRPSELREASWEEFDLDAGLWLIPAERMKRRREHLVPLPNQALELLRELHNITGSFPLLFPGRGDTTK
PRSNTVFLMALRRLGYEGRQTGHGFRHLASTILNENGFDSQHVEAQLSHVKEGVRGVYDKSTYLDQRKVMMQWYADHLDK
LATGNVVQLKRKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0715_01002 YP_008216150.1 Integrase Not tested AbaR27 Protein 3e-128 62
unnamed AAT96071.1 site-specific recombinase Not tested T-PAI Protein 3e-70 43
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 2e-72 42
int AAC31482.1 CP4-like integrase Not tested LEE Protein 1e-63 41
int ACU09430.1 integrase Not tested LEE Protein 1e-63 41
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 2e-63 41
ECs4534 NP_312561.1 integrase Not tested LEE Protein 2e-63 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCA10_49420 YP_008105279.1 hypothetical protein VFG0783 Protein 6e-64 41