Gene Information

Name : PCA10_48180 (PCA10_48180)
Accession : YP_008105155.1
Strain : Pseudomonas resinovorans NBRC 106553
Genome accession: NC_021499
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5317064 - 5318032 bp
Length : 969 bp
Strand : +
Note : -

DNA sequence : 
ATGTTCATGCCCTTCGATTTGCCACAACGCCCCAAACTGGGGATCAGCGCGTGCCTGCTCGGCGACCCCGTGCGCTTCAA
CGGTGGGCACAAGGAGTCGCGGTTGTGCAGCCGCACCCTGACGGAGCACGTCGACTTCGTGGCGCTGTGCCCGGAGGTGG
CCATCGGGCTCGGCATCCCCCGTGAGCCCATCCGCCTGGTGGGCGATCCAGCCGCTCCTCGGGCATTGGGCCGCCACCCA
CAGCGACACGACCACACGGAGCCCCTGGCCGAGTTCGGCGAAATCATGGCGGAGCAGCTTGCTGACATCAGCGGCTACAT
CTTCATGCAGAAATCCCCCTCCTGCGGGCTGCATCGGGTCAAGGTCTACCAGGCCGACGGCCATCCCGCCGAAGGCAGTG
GCCGCGGCATATTCGCCAGTGCCTTCTGCGCCCGCCGCCCCGACTTGCCGGTGGAGGAAGACGGCCGCCTCAGCGACCCG
GTCCTGCGGGAAAACTTCCTCACCCGCGTCTACGCCTACGCCCAGTGGCAGGCGCTGTGCCGCGAAGGGTTGAGCCGCAG
GGCGATCATTGCCTTCCACTCACGTTACAAATACCAGCTGATGGCCAACGACCCGGTGCAATACCGGGCCCTCGGCCGCC
TGCTGGGAAGCATCGGCGAGCACGCGCCGGAGGAAATCGGCCCGCGCTACTTCTCCGCCTTGATGGCGGCCCTGAAGAAG
TGCGCCACCCGTGGCACCCACAGCAACGTGCTGCAGCACCTCAGCGGCTACCTCAAGGCGCACCTGAGTCCGCCCGAGAA
AGTCGAGTTGCAGCGCCTGATCGAACAGTACCGCTGCGGCGTGGTACCGCTGGTGGTGCCGATGACCTTGCTCAAGCATC
ACTTCAGCGGCCATCCGGACCACTACATCGCCCAGCAGGCCTATCTGCAGCCGCACCCGGAAGCGCTCGGCCTGCGCAAC
GCCCTCTAG

Protein sequence : 
MFMPFDLPQRPKLGISACLLGDPVRFNGGHKESRLCSRTLTEHVDFVALCPEVAIGLGIPREPIRLVGDPAAPRALGRHP
QRHDHTEPLAEFGEIMAEQLADISGYIFMQKSPSCGLHRVKVYQADGHPAEGSGRGIFASAFCARRPDLPVEEDGRLSDP
VLRENFLTRVYAYAQWQALCREGLSRRAIIAFHSRYKYQLMANDPVQYRALGRLLGSIGEHAPEEIGPRYFSALMAALKK
CATRGTHSNVLQHLSGYLKAHLSPPEKVELQRLIEQYRCGVVPLVVPMTLLKHHFSGHPDHYIAQQAYLQPHPEALGLRN
AL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 2e-62 42
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 2e-62 42
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 3e-62 42
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 3e-62 42
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 3e-62 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCA10_48180 YP_008105155.1 hypothetical protein VFG0490 Protein 1e-62 42