Gene Information

Name : PCA10_47080 (PCA10_47080)
Accession : YP_008105045.1
Strain : Pseudomonas resinovorans NBRC 106553
Genome accession: NC_021499
Putative virulence/resistance : Virulence
Product : putative ferric siderophore receptor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5196690 - 5199227 bp
Length : 2538 bp
Strand : +
Note : -

DNA sequence :
ATGCAGTACCCGCAACGCCTCCGCCCCTTCACCCGCACGCCCCTCGCCCGCGCCCTGCTGCTGGGCCTTGGCCTGGCTGC
CGCCCTGCCCGCCCAGAGCTTCGCCGCCCCGCTGGAAATAGGCGCGCAGAGCCAGCGCCAGGCCTTCGACATCCCGGCCG
GGCCGTTGGAAGCCGCGCTCAACCAGTTCGGCCGCGAAGCCGGCGTACTGCTGTCCTTCAGCCCCGAGCTGACCGACGGC
CGCACGACCCAGGGCCTGCATGGCCAGTTCGGCATCGACGACGGCCTGCGCCAGTTGCTGGCCGGCAGCGGCCTGGATGC
CACGGCCCAGGACGGCGGCTACAGCCTGCAATCCACCGGCGCCGCCCTGGTGGTGGACCGCCAGGTGGTGGTCGGCTCCC
GCGCGCCCACCAGCATCAGCGAGCTGCCGGGCACCGTGTGGATCATCGACGCGCCCCAGCTGCAGGAGCAGACCCGGGCC
GGCGTGCCCTTCAAGGAAGCCCTGGGCCAGTTGATCCCGGGCCTGGACATCGGCCCCCAGGGCCGGACCAACTTCGGCCA
GAACATGCGCGGCCGCAGTGCCCTGGTGATGATCGACGGCGTGTCCCTGAACAGTTCCCGTGGCATCAGCCGCCAGTTCG
ACTCCATCGACCCGTTCAACGTCGAGCGCATCGAAGTGCTGTCCGGCGCCAGCGCTGTCTACGGTGGCGGCGCCACCGGC
GGCATCATCAACATCGTCACCAAGAAGGGCGAAGAAGGCCCGGCGCGGTTCAACAGCGAAGTGGGCGTGCGCAGCGGCTT
CCAATCCAGCCAGGACCACGACTGGCGCGTGGCCCAGTCGGTCAGTGGCGGCAGCGAGCAGCTCAAGGGCCGCGCCTCGG
TGGCCTACCAGAACAACGGCGCCGCCTACGATGGCAACGGCGACCAGGTGATGCTCGACATCACCCAGACCGACCTGCAG
TACAACCAGGCGGTGGATGTCATGGGCAGCCTCGACTTCGCCTTCGCCAACGGCCACAGCCTGAGCCTGGGCGCCCAGTG
GTACGACTCCGGCTACGACGGTGACAAGGGTGTCGACATGGGCCGCAACTTCTCCGCCCTGCGCGGCGAGCAGCCGTTCG
AGATCAGCGGCGGCGCCAGCTTCGACCGCGAGCCGCGCACCGAGCGCAGCCAGTTCAACGCCACCTACCACGCCCCCGAA
GTGCTCGGCCACGACCTCTACCTGCAGGCCTACTACCGCAGCGAGGAAATGGCCTTCCAGCCCTACCCGAACATCGTCTT
CACCGGCGCCGGTGCCATCAACCCGAGCCGTTCCTACTACTCCGCGTCCCAGCAGGACACCGACTACTACGGGCTGAAAG
CGGTGCTGGTGAAGGAGTGGGACCGCTTCACCCTGACCTACGGCGCCGACATCGAGCGGGAGAGCTTCGACTCCGACCAG
GCCCTGTTCGACCTCGGCACCGCCGCCCAGACCGGCGGCCTGGTTGCTGACGAGTACGCCAAGGTCGGCCGCTACCCGGG
CATCGACACCGACAGCAACTCGCTGTTCGCCCAGGGCAGCTGGCGAGCCACCGACGACCTCACCCTGTCCGGTGGCGTAC
GCCGCCAGCGCACCAACAACGAAGTCGGCGACTTCGTCGCGGCCGCCCAGCAGATCCAGATCAGCAAGGGCAACGGCACC
AGCGCCGACGCCATCCCCGGCGGCGAGAAGGACTACCAGGTCGATCTCTACAACTTCGGCGCGGTGTACAAGCTGAACAA
GGCGCAGCAGGTCTGGGCCAACTACTCCGAAGGCTTCGAGCTGCCCGACCCGGCCAAGTACTACGGCCAGGGCAGCTATT
CCGCGGCACCGGTCAACGGTCACTGGGTGCTGCAGCGCGGCGTCAACGTGAAGGACTCGGCCCTGGACGGCATCAAGACC
AAGCAGGTGGAACTGGGCTGGCGCCACTACGACGGCGGCCTGGACGCCCAATTGGCGGCCTTCTATGCCTGGTCCGACAA
GAGCATCACCTACAACCGCACCACCCTGCTGGTGGAACAGCTGGACAACAAGAAGCGCAACTACGGCCTGGAAGGCCAGG
CCAACTACTGGCTGACCGAGAACTGGCAGGTGGGCACCAGCGCCCTGGCCATCCGCTCCCAGCAAAAGGTGGATGACCGC
TGGCAGAAGCAGGACGTGACCGCCGCCAGCCCCTCCAAGCTGACCGCCTTCGTCGGCTGGCAGGGCGGCGACACCAGCCT
GCGCCTGCAGGGCGTGCGCACCTTCAACCTCTCCGACGACGGCAACGTGCTCGCCAACGGCCAGTTCGACGGCAAGGACC
ACAAGATCGACGGTTACGCCACCTTCGACCTGCTGGGCAGCCACGCCCTGCCGGTGGGCACCCTCAACTTCGGCATCCAG
AACCTGCTGGACAAGGACTACACCACCGTCTGGGGCCAACGTGCGCAGGTGTTCTACAGCGCCAACATCCCCGCCGAACT
GTTCGACTACCGTGGTCGCGGCCGTACCTACAGCCTGAGCTACAGCCTGGAGTTCTGA

Protein sequence :
MQYPQRLRPFTRTPLARALLLGLGLAAALPAQSFAAPLEIGAQSQRQAFDIPAGPLEAALNQFGREAGVLLSFSPELTDG
RTTQGLHGQFGIDDGLRQLLAGSGLDATAQDGGYSLQSTGAALVVDRQVVVGSRAPTSISELPGTVWIIDAPQLQEQTRA
GVPFKEALGQLIPGLDIGPQGRTNFGQNMRGRSALVMIDGVSLNSSRGISRQFDSIDPFNVERIEVLSGASAVYGGGATG
GIINIVTKKGEEGPARFNSEVGVRSGFQSSQDHDWRVAQSVSGGSEQLKGRASVAYQNNGAAYDGNGDQVMLDITQTDLQ
YNQAVDVMGSLDFAFANGHSLSLGAQWYDSGYDGDKGVDMGRNFSALRGEQPFEISGGASFDREPRTERSQFNATYHAPE
VLGHDLYLQAYYRSEEMAFQPYPNIVFTGAGAINPSRSYYSASQQDTDYYGLKAVLVKEWDRFTLTYGADIERESFDSDQ
ALFDLGTAAQTGGLVADEYAKVGRYPGIDTDSNSLFAQGSWRATDDLTLSGGVRRQRTNNEVGDFVAAAQQIQISKGNGT
SADAIPGGEKDYQVDLYNFGAVYKLNKAQQVWANYSEGFELPDPAKYYGQGSYSAAPVNGHWVLQRGVNVKDSALDGIKT
KQVELGWRHYDGGLDAQLAAFYAWSDKSITYNRTTLLVEQLDNKKRNYGLEGQANYWLTENWQVGTSALAIRSQQKVDDR
WQKQDVTAASPSKLTAFVGWQGGDTSLRLQGVRTFNLSDDGNVLANGQFDGKDHKIDGYATFDLLGSHALPVGTLNFGIQ
NLLDKDYTTVWGQRAQVFYSANIPAELFDYRGRGRTYSLSYSLEF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iutA NP_839219.1 ferric siderophore receptor Virulence SHI-2 Protein 8e-140 45
iutA NP_709458.2 ferric siderophore receptor Virulence SHI-2 Protein 8e-140 45
iutA AAD44750.1 IutA Virulence SHI-2 Protein 2e-138 45
iutA AAK71635.1 IutA Virulence SHI-3 Protein 2e-139 45
iutA YP_002414042.1 Ferric aerobactin receptor Virulence Not named Protein 3e-139 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCA10_47080 YP_008105045.1 putative ferric siderophore receptor VFG0619 Protein 4e-140 45
PCA10_47080 YP_008105045.1 putative ferric siderophore receptor VFG1085 Protein 1e-139 45
PCA10_47080 YP_008105045.1 putative ferric siderophore receptor VFG0936 Protein 1e-139 45