Gene Information

Name : colR (PCA10_46980)
Accession : YP_008105035.1
Strain : Pseudomonas resinovorans NBRC 106553
Genome accession: NC_021499
Putative virulence/resistance : Virulence
Product : two-component response regulator ColR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5187774 - 5188457 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence : 
ATGCGCATCCTGCTGGTCGAAGACAACAACGACATCCTGGCCAACATGGTCGATTTCCTCGAACTCAAGGGCTACAGCGT
CGATTGCGCACGGGACGGCCTGTCCGGCCTGCATCTCGCCAGCAGCGAGCATTTCGACCTGATCGTGCTGGACATCATGT
TGCCGGGGCTGGATGGCTACAACCTGTGCCGGCGCCTGCGCGAAGAGGCGCGGCGCGATACCCCGGTGATCATGCTCACC
GCCCGCGATGCCCTGGACGATCGTCTGCAGGGCTTCAAGTCCGGCGCCGACGACTACCTGCTCAAACCCTTCGCCCTGTC
CGAACTCGCCGCCCGCATCGAGGCGGTTCTGCGTCGCTCCCAGGGCGGCGGCAAGCGCAGCCTGCAGGTGGCCGATCTCA
GCTATGACCTGGACACCCTGGAAGTCAGCCGGGGTGGCAAGTCGCTCAAGCTCAACCCCATTGGCCTCAAGCTGCTCGCC
GTGCTGATGCAGAAGAGTCCCCACCTGGTGCGTCGCGAGGCGCTGGAAGAGGCCTTGTGGGGCGACGACTGCCCCGACAG
CGACAGCCTGCGCAGCCACATCCACCAGTTGCGCCAGGTGATCGACAAACCCTTCGCCAAGCCGTTGCTGCATACCCTGC
ACGGGCTGGGCTATCGCCTGGCGGAGTCCGCCGATGGAGTTTAA

Protein sequence : 
MRILLVEDNNDILANMVDFLELKGYSVDCARDGLSGLHLASSEHFDLIVLDIMLPGLDGYNLCRRLREEARRDTPVIMLT
ARDALDDRLQGFKSGADDYLLKPFALSELAARIEAVLRRSQGGGKRSLQVADLSYDLDTLEVSRGGKSLKLNPIGLKLLA
VLMQKSPHLVRREALEEALWGDDCPDSDSLRSHIHQLRQVIDKPFAKPLLHTLHGLGYRLAESADGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-37 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-36 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
colR YP_008105035.1 two-component response regulator ColR BAC0487 Protein 8e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
colR YP_008105035.1 two-component response regulator ColR VFG0596 Protein 6e-38 43