Gene Information

Name : xerD (PCA10_46230)
Accession : YP_008104960.1
Strain : Pseudomonas resinovorans NBRC 106553
Genome accession: NC_021499
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5116520 - 5117416 bp
Length : 897 bp
Strand : -
Note : -

DNA sequence :
ATGCCCGCTCTGGACCACCCTCTGATCGACCGCTTCCTCGATGCCCTCTGGCTGGAGAAGGGGCTTTCGGCGCACACGCG
ATCCGCCTACCGCAGTGATCTCGCGCACTTCAATGCCTGGCTCGACGAGCGCGGCCTGGCCCTGGACAAGGCCGGACGCG
ACCTGATCCTCGACCACCTCGCCTGGCGCCTGGAACAGGGTTACAAGGCCCGTTCCACCGCGCGCTTCATCTCCGGCCTG
CGCGGCTTCTACCGCTTCCTGCTGCGGGAGAACCTGATCACCGAGGACCCGACCTTGCAGGTGGACCTGCCGCAGCTCGG
CCGGCCGCTGCCCAAGTCGTTGTCCGAGGCCGATGTGGAGGCGCTGCTGGACGCGCCGGAGCTGGACGACCCCATCGGCC
TGCGCGACCGCGCCATGCTCGAGGTGCTCTACGCCTGCGGCCTGCGGGTCACCGAGCTGGTGAGCCTGACCCTGGAGCAG
GTCAACTTGCGCCAGGGCGTGCTCAAGGTCTTCGGCAAGGGCAGCAAGGAGCGCCTGGTGCCATTGGGTGAGGAAGCCAT
CGCCTGGCTCGAGCGCTACCAGCGCGAGGCGCGGCCCTTCCTGCTCGACGGCAAGCCCAGCGACGTGCTTTTCCCCAGTC
TGCGCGGCGAGCAGATGACCCGCCAGACCTTCTGGCACCGCATCAAGCACCAGGCCCAGGTGGCCGGCATCAGCAAATCG
CTGTCGCCGCATACCCTGCGCCACGCCTTTGCCACCCACCTGCTCAACCACGGCGCCGACCTGCGCGTGGTCCAGATGCT
GCTCGGCCACAGCGACCTCTCCACCACCCAGATCTACACCCACATCGCCCAGGCCCGCCTGCAGGAACTCCACGCTCGCC
ACCACCCTCGCGGGTGA

Protein sequence :
MPALDHPLIDRFLDALWLEKGLSAHTRSAYRSDLAHFNAWLDERGLALDKAGRDLILDHLAWRLEQGYKARSTARFISGL
RGFYRFLLRENLITEDPTLQVDLPQLGRPLPKSLSEADVEALLDAPELDDPIGLRDRAMLEVLYACGLRVTELVSLTLEQ
VNLRQGVLKVFGKGSKERLVPLGEEAIAWLERYQREARPFLLDGKPSDVLFPSLRGEQMTRQTFWHRIKHQAQVAGISKS
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHIAQARLQELHARHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-66 55
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-66 55