Gene Information

Name : fliP (PCA10_42180)
Accession : YP_008104555.1
Strain : Pseudomonas resinovorans NBRC 106553
Genome accession: NC_021499
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4632990 - 4633739 bp
Length : 750 bp
Strand : +
Note : -

DNA sequence :
ATGATCCGTCGCCTGGCCTGTCTCGCCCTGCTGCTGGCCGGCTGCGCGCCGCTGCTGGCCCAGGCCGCGGGTGGCGACAT
CACACTGTTCAACCTGAACCAGACGGAAAACGGCCAGGCATTCAGCGTCAAGTTGCAGATCCTGATCGTCATGACGCTGC
TGGGCTTCCTGCCGGCCATGCTCATGCTGATGACCTGCTTCACCCGCTTCGTCATCGTGCTGGCCATCCTGCGCCAGGCC
ATCGGCCTGCAGCAGAGCCCGCCGAACAACGTGCTGGTGGGCATCGCGCTGATCATGACGCTGCTGGTGATGCGCCCGGT
CTGGCAGGAGATGTACAGCACGGCCTACCAGCCCTTCGAGGCCGACGCCATTTCCCTGGAAGAGGGCCTGGAGCGGGCCA
AGACCACCCTGTCGCACTTCATGCTGGCGCAGACCAACCGCAACTCCCTGGAAACCATGGTGTCGCTGGCCGGCGAGAAG
ATGCCGGACAAGCTGGAGGAGCTGGACTTCTCCCTGCTGCTGCCGTCCTTCGTGCTGAGCGAGCTGAAGACCGCCTTCCA
GCTCGGCTTCATGATCTTCGTGCCCTTCCTGGTGATCGACCTGGTGGTAGCCAGTGTGCTGATGGCGATGGGCATGATGA
TGCTTTCGCCGATGATGATTTCCCTGCCCTTCAAGCTGATGGTGTTCGTCCTCGTGGACGGCTGGGCCCTGATGATGGGC
ACCCTGACCACCAGCGTGCAGCCGTTCTGA

Protein sequence :
MIRRLACLALLLAGCAPLLAQAAGGDITLFNLNQTENGQAFSVKLQILIVMTLLGFLPAMLMLMTCFTRFVIVLAILRQA
IGLQQSPPNNVLVGIALIMTLLVMRPVWQEMYSTAYQPFEADAISLEEGLERAKTTLSHFMLAQTNRNSLETMVSLAGEK
MPDKLEELDFSLLLPSFVLSELKTAFQLGFMIFVPFLVIDLVVASVLMAMGMMMLSPMMISLPFKLMVFVLVDGWALMMG
TLTTSVQPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 2e-18 41
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 2e-18 41
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 2e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_008104555.1 flagellar biosynthesis protein FliP VFG1259 Protein 3e-44 57
fliP YP_008104555.1 flagellar biosynthesis protein FliP VFG2016 Protein 3e-43 56
fliP YP_008104555.1 flagellar biosynthesis protein FliP VFG2338 Protein 3e-39 51
fliP YP_008104555.1 flagellar biosynthesis protein FliP VFG2494 Protein 2e-43 51
fliP YP_008104555.1 flagellar biosynthesis protein FliP VFG2455 Protein 1e-18 42
fliP YP_008104555.1 flagellar biosynthesis protein FliP VFG0044 Protein 1e-17 41
fliP YP_008104555.1 flagellar biosynthesis protein FliP VFG0394 Protein 3e-18 41