|
Name : PCA10_36800 (PCA10_36800) Accession : YP_008104017.1 Strain : Pseudomonas resinovorans NBRC 106553 Genome accession: NC_021499 Putative virulence/resistance : Unknown Product : putative peptide ABC transporter ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 4044021 - 4045628 bp Length : 1608 bp Strand : + Note : - DNA sequence : ATGAGCGAGAACCTGATCGAAATCCGCGACCTCGCCGTCGAGTTCGTCACCGGCGACAAGACCCAGCGCGTGGTCGAAGG CATCAGCTTCGACATTCGCAAGGGCGAGACTCTGGCACTGGTGGGCGAAAGCGGCTCCGGCAAATCGGTGACGGCGCACT CCATCCTGCGCCTGTTGCACTACCCCCTGGCGCGTCATCCCAGCGGCACCATCCACTACGCCGGCAAGGACCTCTTGAAG CTTCCGGAGGCCAAGCTGCGCGGCATTCGCGGCAACCGCATCGCCATGGTCTTCCAGGAGCCGATGACCTCGCTCAACCC GCTGCACAATATCGAGAAGCAGATCAACGAGGTGCTCGCCCTGCACAAGGGGCTCACCGGCAAGGCCGCCACCCGGCGTA CCCTGGAGCTGCTGGAGCTGGTGGGCATCCCCGAACCGCACAAGCGCCTGAAGGCCTTCCCCCACGAGCTCTCGGGTGGC CAGCGCCAACGGGTGATGATCGCCATGGCCCTGGCCAACGAGCCGGAACTGCTGATCGCCGACGAACCCACCACGGCCCT GGACGTCACCGTCCAGCTGAAAATCCTCGAGCTGCTCAAGGAACTGCAGGCGCGCCTGGGCATGGCCCTGCTGCTGATCA GCCATGATCTGAACCTGGTTCGGCGAATTGCGCATCGCGTATGTGTCATGCAGCGCGGTTGTATCGTCGAACAAGCGTCG TGTGATGAGCTGTTCCATGCACCCAAGCATCCCTACACCCGGGAACTGCTCGGCGCAGAGCCTTCGGGCCGGCCGGCGGA CAACCCCGTAGGGGGCCCGCTGCTGGAGGTCAAGGACCTGCGCGTGTGGTTCCCGATCAAGAAGGGGCTGCTGCGGCACA CCGTGGATCACGTCAAGGCCGTGGACGGCGTCAATTTCAGCCTGCCCCGGGGTCAGACCCTGGGGATCGTGGGCGAAAGC GGCTCCGGCAAGTCCACGCTGGGCCTGGCGATCCTCCGGTTGCTCGGCAGCCGGGGCGACATCCGCTTCCAGGGCCAAGC CCTGGACGGCCTGTCGCAGAAGGAAGTGCGGCCGTTTCGGCGCGAGATGCAGGTGGTCTTCCAGGACCCCTTCGGCAGTC TGAGCCCACGCATGTGCGTGGGCGACATTGTCGGCGAGGGCCTGCGGATCCACCGCATGGGCACCGAGGCGGAGCAGGAG CAGGCCATCATCGACGCGCTCCTGGAGGTAGGTCTGGACCCGGAAACCCGGAACCGCTACCCCCACGAGTTTTCCGGAGG GCAGCGGCAGCGGATTGCCATTGCCCGGGCATTGGTGCTGAAACCGGCACTGATCCTGCTGGACGAGCCCACCTCGGCGC TCGACCGGACGGTTCAGCGCCAAGTGGTGGAGTTGTTGCGCAGGCTACAGACCAAGTACGACCTGACCTACCTGTTCATC AGCCATGACCTGGCTGTGGTCCGGGCTCTGAGCCACCAGCTGATGGTGATCAAGCACGGTCAGGTGGTCGAACAGGGTCC GGCCGACGCCATTTTCGCCGCCCCGCAGCACAGCTATACGAAGCAGTTGCTGGAAGCCGCATTCCTGGCTCCGGAAACTG CCCATTAA Protein sequence : MSENLIEIRDLAVEFVTGDKTQRVVEGISFDIRKGETLALVGESGSGKSVTAHSILRLLHYPLARHPSGTIHYAGKDLLK LPEAKLRGIRGNRIAMVFQEPMTSLNPLHNIEKQINEVLALHKGLTGKAATRRTLELLELVGIPEPHKRLKAFPHELSGG QRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQRGCIVEQAS CDELFHAPKHPYTRELLGAEPSGRPADNPVGGPLLEVKDLRVWFPIKKGLLRHTVDHVKAVDGVNFSLPRGQTLGIVGES GSGKSTLGLAILRLLGSRGDIRFQGQALDGLSQKEVRPFRREMQVVFQDPFGSLSPRMCVGDIVGEGLRIHRMGTEAEQE QAIIDALLEVGLDPETRNRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRRLQTKYDLTYLFI SHDLAVVRALSHQLMVIKHGQVVEQGPADAIFAAPQHSYTKQLLEAAFLAPETAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 8e-79 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 8e-79 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 8e-79 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 8e-79 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 6e-95 | 42 |
