Gene Information

Name : pedI (PCA10_31320)
Accession : YP_008103469.1
Strain : Pseudomonas resinovorans NBRC 106553
Genome accession: NC_021499
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase PedI
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.-
Position : 3450738 - 3452258 bp
Length : 1521 bp
Strand : -
Note : -

DNA sequence :
ATGATCTACGCGCAACCAGGCACTCCCGGCGCCGTCGTCAGCTTCAAGCCCCGTTACGGCAACTACATCGGCGGCGAGTT
CGTCGCCCCGCTGGGTGGCCAGTACTTCACCAATACCTCGCCGGTGAACGGTGAGGTGATCGCCGAGTTCCCCCGTTCCG
GCGCCGAAGACGTGGAGAGGGCCCTGGACGCCGCCCACGCCATCGCCGATGCCTGGGGCAAGACCTCGGTGCAGGACCGC
GCGCTGATCCTGCTGAAGATCGCCGACCGCATCGAGCAGAACCTCGAAGTCCTGGCCGTCGCCGAAACCTGGGACAACGG
CAAGGCCGTGCGCGAGACCCTGAACGCCGACGTGCCTCTGGCCGCCGATCACTTCCGCTACTTCGCCGGCTGCATCCGCG
CCCAGGAGGGCTCCGCCGCCGAGATCAACGAGCACACCGCCGCCTACCACTTCCACGAGCCCCTGGGTGTGGTGGGGCAA
ATCATCCCGTGGAACTTCCCGCTGCTGATGGCCGCCTGGAAGCTGGCCCCGGCCCTGGCCGCCGGCAACTGCGTGGTGCT
CAAGCCGGCCGAGCAGACCCCGCTGTCGATCATGGTGCTGGCCGAAATCATCGGCGACCTGCTGCCGCCCGGCGTGCTGA
ACATCGTCCAGGGCTTCGGCAAGGAAGCGGGCCAGGCCCTGGCCACCAGCAAGCGCATCGCCAAGATCGCCTTCACCGGC
TCCACCCCGGTGGGCTCGCACATCCTCCATTGCGCGGCGGAGAACATCATCCCCTCCACCGTGGAACTGGGCGGCAAGAG
CCCGAACATCTTCTTCGAGGACATCATGGCCGCTGAGCCGGCGTTCATCGAGAAAGCCGCCGAGGGCCTGGTGCTGGCCT
TCTTCAACCAGGGCGAGGTGTGCACTTGCCCGTCCCGCGCGCTGGTGCAGGAATCGATCTTCGAGCCGTTCATGGTGGAG
GTGATGAAGAAGATCAAGGCGATCAAGCGCGGCAACCCGCTGGACACCGACACCATGGTCGGCGCCCAGGCGTCCGAGCA
GCAATACGACAAGATCCTCAGCTACCTCGACATCGCCCAGCAGGAAGGCGCCGAGCTGCTCGCCGGTGGCGCGTCCGAAC
GACTGCCGGGCGACCTCGCCAGCGGCTTCTACATCCAGCCGACCCTGCTCAAGGGCCACAACAAGATGCGCGTGTTCCAG
GAGGAAATCTTCGGCCCGGTGGTGGGCGTCACCACCTTCAAGGATGAGGCCGAGGCCCTGGCGATCGCCAACGACACCGA
GTTCGGCCTCGGCGCCGGCGTGTGGACCCGCGACATCAACCGCGCCTACCGCATGGGCCGTGGCATCAAGGCCGGCCGCG
TGTGGACCAACTGCTACCACCTGTACCCGGCCCACGCCGCGTTCGGTGGCTACAAGAAGTCCGGCGTCGGCCGCGAGACC
CACAAGATGATGCTCGACCACTACCAGCAGACCAAGAACCTGCTGGTGAGCTACGACATCAATCCGCTGGGCTTCTTCTG
A

Protein sequence :
MIYAQPGTPGAVVSFKPRYGNYIGGEFVAPLGGQYFTNTSPVNGEVIAEFPRSGAEDVERALDAAHAIADAWGKTSVQDR
ALILLKIADRIEQNLEVLAVAETWDNGKAVRETLNADVPLAADHFRYFAGCIRAQEGSAAEINEHTAAYHFHEPLGVVGQ
IIPWNFPLLMAAWKLAPALAAGNCVVLKPAEQTPLSIMVLAEIIGDLLPPGVLNIVQGFGKEAGQALATSKRIAKIAFTG
STPVGSHILHCAAENIIPSTVELGGKSPNIFFEDIMAAEPAFIEKAAEGLVLAFFNQGEVCTCPSRALVQESIFEPFMVE
VMKKIKAIKRGNPLDTDTMVGAQASEQQYDKILSYLDIAQQEGAELLAGGASERLPGDLASGFYIQPTLLKGHNKMRVFQ
EEIFGPVVGVTTFKDEAEALAIANDTEFGLGAGVWTRDINRAYRMGRGIKAGRVWTNCYHLYPAHAAFGGYKKSGVGRET
HKMMLDHYQQTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-150 66
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 5e-158 65
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 5e-158 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 5e-158 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-157 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pedI YP_008103469.1 aldehyde dehydrogenase PedI VFG0082 Protein 1e-150 66