Gene Information

Name : PCA10_03020 (PCA10_03020)
Accession : YP_008100639.1
Strain : Pseudomonas resinovorans NBRC 106553
Genome accession: NC_021499
Putative virulence/resistance : Resistance
Product : putative cystathionine gamma-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 323697 - 324881 bp
Length : 1185 bp
Strand : +
Note : -

DNA sequence :
ATGAGCCAGCAGGACGATCCGACCCCACGCGCCTTCGCCACTCGTGTGATCCACGCCGGCCAGGCCCCCGACCCCAGCAC
CGGCGCCATCATGCCGCCGATCTATGCCAACTCCACCTATGCCCAGGAGAGCCCCGGCGTGCACAAGGGGCTGGACTACG
GACGCTCGCACAACCCAACACGCTTCGCCCTGGAACGCTGCGTCGCGGACCTGGAGGGTGGCGCCCAGGCCTTCGCCTTC
GCCTCCGGGCTGGCGGCCATCGGCACGGTGCTGGAGCTGCTCGACGCCGGCTCCCACATCGTCGCCAGCAATGACCTCTA
TGGCGGCACCTTCCGCCTGTTCGAGCGGGTGCGCCGGGCCAGCGCCGGGCACCGCTTCAGCTTCGTCGATTTCAGCGACC
TTGCCTCCATCGGCGCAGCGATCAGCGACGACACGCGCATGCTCTGGGTGGAAACCCCGAGCAATCCGCTGTTGCGCCTG
GCCGATCTGGAAGCCATCGCCGAACTCTGCCAGGGGCGGGGCATCATCCTGGTGGCGGACAACACCTTCGCCAGCCCCTG
GACCCAGCGCCCGCTGGAGCTGGGCTTCGACCTGGTGGTGCACTCCACCACCAAGTACCTCAACGGCCACTCCGACGTGA
TCGGCGGCATCGCCATCGTTTCCGGCGAAAGCCGTTGTGAACCGCTGCGCGAGCGCCTGGGCTTCCTGCAGAACGCCGTG
GGCGCCATCGCCGGGCCCTTCGACGCCTTCCTCACCCTGCGCGGGGTGAAGACCCTGGCCCTGCGCATGGAGCGCCACTG
CAGCAATGCCCTGGAACTGGCCTACTGGCTGGAGCAACAGCCGCAGGTGGCGCGGGTCTACTACCCCGGCCTGCAATCCC
ACCCGCAGCACGCGCTGGCGCGGCGGCAGATGCATGGCTACGGCGGGATGATCTCCCTCGACTTGCGGGCCGACCTCGCG
GGCACCCGACGCTTCCTCGAAGCCGTGCGCATCTTCACCCTGGCCGAGAGCCTGGGGGGCGTGGAAAGCCTGATCGAGCA
CCCGGGCATCATGACCCACGCCAGCATCCCGGCGGAGATCCGTGCCGAGTTGGGCATAGGCGACTCGCTGGTGCGGTTGT
CGGTGGGAGTGGAAGAGGTGGAAGACCTGCGCGCGGACCTGGCGCAGGCGTTGGGGAAGGTCTGA

Protein sequence :
MSQQDDPTPRAFATRVIHAGQAPDPSTGAIMPPIYANSTYAQESPGVHKGLDYGRSHNPTRFALERCVADLEGGAQAFAF
ASGLAAIGTVLELLDAGSHIVASNDLYGGTFRLFERVRRASAGHRFSFVDFSDLASIGAAISDDTRMLWVETPSNPLLRL
ADLEAIAELCQGRGIILVADNTFASPWTQRPLELGFDLVVHSTTKYLNGHSDVIGGIAIVSGESRCEPLRERLGFLQNAV
GAIAGPFDAFLTLRGVKTLALRMERHCSNALELAYWLEQQPQVARVYYPGLQSHPQHALARRQMHGYGGMISLDLRADLA
GTRRFLEAVRIFTLAESLGGVESLIEHPGIMTHASIPAEIRAELGIGDSLVRLSVGVEEVEDLRADLAQALGKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-74 47
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-73 47
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-53 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCA10_03020 YP_008100639.1 putative cystathionine gamma-lyase BAC0207 Protein 2e-66 45