Gene Information

Name : gacA (PCA10_25430)
Accession : YP_008102880.1
Strain : Pseudomonas resinovorans NBRC 106553
Genome accession: NC_021499
Putative virulence/resistance : Virulence
Product : two-component response regulator GacA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2794705 - 2795349 bp
Length : 645 bp
Strand : +
Note : -

DNA sequence : 
TTGATTAGGGTGCTGGTGGTCGATGACCACGATCTGGTGAGAACGGGGATTACCCGCATGCTGGCCGATGTAGATGGCCT
GCAGGTAGTAGGCCAGGCCGATTGCGGCGAGGAAGCCCTGAAGAAAGCGCGGGAGCTCAAGCCTGACGTCGTCCTGATGG
ACGTCAAGATGCCCGGCATCGGTGGCCTTGAAGCCACTCGCAAGCTGCTGCGCAGCCATACCGACATGAAAGTGGTGGCG
GTGACCGCCTGCGAGGAAGACCCTTTCCCGACCCGGCTGCTGCAAGCCGGTGCGGCGGGTTACCTGACCAAGGGCGCCGC
CCTGGAAGAGATGATTCAGGCGATCCGCCAGGTCTTTGCCGGCCAGCGTTTCATCAGTCCGCAGATCGCCCAGCAATTGG
CGCTCAAGTCCTTCCAGCCGCAGTCCAATGGTTCGCCGTTCGACCTGCTTTCCGAACGGGAGATTCAGATCGCCCTGATG
ATCGCCAACTGCCAGAAGGTGCAGAGCATTTCGGACAAGCTCTGCCTGTCGCCGAAGACAGTGAACACCTACCGCTATCG
CATCTTCGACAAGCTCTCGATTTCCAGCGACGTGGAGTTGGTACTGCTGGCGGTTCGGCACGGCATGGTAGACGCCGTCA
GCTAA

Protein sequence : 
MIRVLVVDDHDLVRTGITRMLADVDGLQVVGQADCGEEALKKARELKPDVVLMDVKMPGIGGLEATRKLLRSHTDMKVVA
VTACEEDPFPTRLLQAGAAGYLTKGAALEEMIQAIRQVFAGQRFISPQIAQQLALKSFQPQSNGSPFDLLSEREIQIALM
IANCQKVQSISDKLCLSPKTVNTYRYRIFDKLSISSDVELVLLAVRHGMVDAVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 6e-52 54
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 6e-52 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gacA YP_008102880.1 two-component response regulator GacA VFG1889 Protein 6e-50 53