Gene Information

Name : lolD (PCA10_21400)
Accession : YP_008102477.1
Strain : Pseudomonas resinovorans NBRC 106553
Genome accession: NC_021499
Putative virulence/resistance : Resistance
Product : lipoprotein-releasing ABC transporter ATP-binding protein LolD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2340080 - 2340763 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTAACAAGGCAGTCCTGAGTTGCCGCAACCTGGGCAAGAGCTACGAGGAGGGCCCGCAATCGGTCGAAGTGCTGTC
CGGCGTCGAGCTGGAACTGCATCCGGGCGAGCGGGTGGCGATCGTGGGCAGCTCCGGCTCCGGCAAGAGCACCCTGCTGA
ACATGCTGGGCGGGCTGGATACGCCGAGCAAGGGCAGCGTCTGGCTGGCCGGCGAAGAGCTGTCCGCCCTGAGCGAGACC
GCCCGTGGCCTGCTGCGCAACCGCGCCCTGGGCTTCGTCTACCAGTTCCACCACCTGCTGCCGGAGTTCACCGCCCTGGA
GAACGTCTGCATGCCGCTGCTGATCGGCCGCACCACCATCGCCGAGGCGCGCCAGCGCTCCACCGCGCTGCTGGAGCGGG
TCGGCCTGGGCCATCGCCTGTCGCACAAGCCGGCGGAGCTCTCCGGCGGCGAGCGCCAGCGCGTGGCCATTGCCCGTGCC
TTGGTCAACAACCCGGCACTGGTGCTGCTCGACGAGCCCACCGGCAACCTCGACCAGCACACCGCCCATGGCATCCAGGA
GCTGATGCTCGAACTGAGCGGTTCCCTGCGCACCGCCTTCCTTGTGGTGACCCATGACCTGCAGCTGGCCCGCCAGATGG
ACCGGGTGCTGCGCCTGGAAGAAGGCCGACTGGTGGCTGCCTGA

Protein sequence : 
MSNKAVLSCRNLGKSYEEGPQSVEVLSGVELELHPGERVAIVGSSGSGKSTLLNMLGGLDTPSKGSVWLAGEELSALSET
ARGLLRNRALGFVYQFHHLLPEFTALENVCMPLLIGRTTIAEARQRSTALLERVGLGHRLSHKPAELSGGERQRVAIARA
LVNNPALVLLDEPTGNLDQHTAHGIQELMLELSGSLRTAFLVVTHDLQLARQMDRVLRLEEGRLVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-27 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-28 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_008102477.1 lipoprotein-releasing ABC transporter ATP-binding protein LolD NC_008702.1.4606598. Protein 3e-33 45
lolD YP_008102477.1 lipoprotein-releasing ABC transporter ATP-binding protein LolD NC_012469.1.7686878. Protein 2e-38 44