Gene Information

Name : mdeA (PCA10_02010)
Accession : YP_008100538.1
Strain : Pseudomonas resinovorans NBRC 106553
Genome accession: NC_021499
Putative virulence/resistance : Unknown
Product : methionine gamma-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 219437 - 220627 bp
Length : 1191 bp
Strand : +
Note : -

DNA sequence :
ATGCCCGAATCCAAACCCGGCCTGTCCACCCGTTCCGTGCACAGCGGCAACGAGGTCGACCGCCGCATGGTCACCCGGCC
CAAGAGCCTGCCGATCTACGAGTCCTCGGTGTTCGTCTACGACTCCCTGGAGCAGGTGGACGACTTCCTCGCCGGCAACC
CCGACAACTACATGTACACCCGCATCGCCAACCCCAACCAGGCGGCGGTGGAGGAGTTGGTGCGCGAGCTGGAAGGCGGC
GCGGCGGCGCTGTTCTCCGCCTCCGGCATGGCCTCGGTGAGCGCGGCGCTGCTGGGGCGGCTGAATGCCGGCGACCACCT
GATCGCCAGCCGCGAGCTGTACGGCACCACCCAGAGCCTGATCGAGAAGGAGCTGGCGCGCTTCGGCATCAGCGCTACCC
TGGTGGAGATCAACGACCTGGCGGCAGTGGAGGCGGCCATCACTCCGGCGACCAGGATCATCTACACCGAGACCGCCTCC
AACCCGCTGGTGCGGGTCAGCGACGTGCCGGCCCTGGCGCGGCTGGCCAAGGCCCATGGCCTCAAGCTGCTGGTGGACAA
CACCTTCCTCTCGCCGGCGCTCTACCACCCCCTGGCCGATGGCGCCGACCTGGTGCTGCACAGCACCACCAAGTACCTCA
ACGGCCACAGCGATGCCACCGGCGGCATTCTCGTCGGCGATGCCGAGTGGATCGCCCAGGCGCGGCGCTTCCAGATCAAC
GCCGGCGGCAGCGCCAGCCCCTTCGAGGCCTGGCTGACCTTCCGCGGCGCCAAGACCCTGACCCTGCGCATGAAGGCCCA
CTCGGCCAACGCGCAGGCATTGGCCACGGCCCTGGAAGCCCACCCCAAGGTCGCCCAGGTGTTCTATCCCGGCCTGCCCT
CGCACCCGGACCACGCCCTGGCCGCGCGGCTGTTCCCCAAGGGCGCCTCGGGCATGCTGAGTTTCACCTTGCACGGCGGC
CTGGCCGAGGTGGACCGACTGATCCGCGCCCTGAAGAACACCGCCTTCGCGCCTTCCCTGGCGGGGGTGGCCAGCAGCAT
CACCCACCCCGGCAAGACCAGCCACCGCGCCCTGTCGCCGGAGGCCCTGGCCGAGCTGGACATCCACGACGGCACCATCC
GCGTGTCGGTGGGCATCGAGGATGCCGAGGACATCATCGACGACTTCGTGCAGGCGCTGGATAGCCTCTGA

Protein sequence :
MPESKPGLSTRSVHSGNEVDRRMVTRPKSLPIYESSVFVYDSLEQVDDFLAGNPDNYMYTRIANPNQAAVEELVRELEGG
AAALFSASGMASVSAALLGRLNAGDHLIASRELYGTTQSLIEKELARFGISATLVEINDLAAVEAAITPATRIIYTETAS
NPLVRVSDVPALARLAKAHGLKLLVDNTFLSPALYHPLADGADLVLHSTTKYLNGHSDATGGILVGDAEWIAQARRFQIN
AGGSASPFEAWLTFRGAKTLTLRMKAHSANAQALATALEAHPKVAQVFYPGLPSHPDHALAARLFPKGASGMLSFTLHGG
LAEVDRLIRALKNTAFAPSLAGVASSITHPGKTSHRALSPEALAELDIHDGTIRVSVGIEDAEDIIDDFVQALDSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-51 42