Gene Information

Name : xcpV (PCA10_20280)
Accession : YP_008102365.1
Strain : Pseudomonas resinovorans NBRC 106553
Genome accession: NC_021499
Putative virulence/resistance : Virulence
Product : type II secretion system protein XcpV
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2206597 - 2206986 bp
Length : 390 bp
Strand : +
Note : -

DNA sequence :
ATGAAAGGCAGTCGCGGCTTCACCCTGATCGAAGTGCTGGTGGCCCTGGCCATCTTCGCGGTGGTCGCCGCCAGCGTACT
CACCGCCAGCGCGCGCAGCCTGCAGATCGCCTCGCGGCTGGAGGACAAGACCCTCGCCATGTGGATCGCCGACAACCGCC
TGACCGAGCTGCAGCTGCGCAGCACGCCCCCGGGCAATGGCCGCGACCAGGGCGAGCTGGATTACGGCGGTCGGCGCTGG
GAATGGCAGAGCCAGATCGATGCCACCACTGATCCGGCGCTACGCCGGGTCACTCTCTGGGTGGCGCCGCGTCCGAACCG
GGGCATCGGCGGCAAGCTGGAAGACCGGGCCACGGTGCGCCTGGTGGGCTTCGTCGGGAGCACGCCATGA

Protein sequence :
MKGSRGFTLIEVLVALAIFAVVAASVLTASARSLQIASRLEDKTLAMWIADNRLTELQLRSTPPGNGRDQGELDYGGRRW
EWQSQIDATTDPALRRVTLWVAPRPNRGIGGKLEDRATVRLVGFVGSTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspI CAE85229.1 GspI, hypothetical type II secretion protein Not tested PAI V 536 Protein 6e-04 42
gspI YP_854402.1 type II secretion protein GspI Not tested PAI I APEC-O1 Protein 0.002 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
xcpV YP_008102365.1 type II secretion system protein XcpV VFG0178 Protein 8e-30 69
xcpV YP_008102365.1 type II secretion system protein XcpV VFG2052 Protein 1e-04 42