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Name : xcpS (PCA10_20250) Accession : YP_008102362.1 Strain : Pseudomonas resinovorans NBRC 106553 Genome accession: NC_021499 Putative virulence/resistance : Virulence Product : type II secretion system protein XcpS Function : - COG functional category : - COG ID : - EC number : - Position : 2204363 - 2205577 bp Length : 1215 bp Strand : + Note : - DNA sequence : ATGGCCGCATTCGAATACCTCGCACTCGATAGCAAGGGTCGCCAGCAGAAGGGTGTGCTGGAGGCCGACAGCGCTCGCCA GGTGCGCCAGCTGCTGCGCGAACGCCAGCTGGCGCCGCTGGAAGTGCGCGCCACTCGCGTGCGCGAGCAGGCCGAGCGCG GTCGCTTCAGCCTGGTGCGCGGGCTGTCCGCCCGTGACCTGGCGCTGGTGACGCGGCAACTCGCGACCCTGGTGCAGGCC GCGCTGCCCATCGAAGAAGCGTTGCGGGCGGCGGCCGCGCAGTCCAGCAGTTCGCGCATCCAGTCCATGCTGCTGGCGGT GCGCGCGCGGGTACTGGAAGGCCACAGCCTGGCCAGCAGCCTGCGGGAGTTTCCCTCGGCCTTCCCCGAGCTCTATCGCG CCACGGTGTCCGCCGGCGAGCATGCCGGCCACCTGGGGCCGGTGCTGGAGCAGTTGGCCGACTACACCGAACAACGCCAG CAGTCGCGGCAGAAGATCCAGCTGGCGCTGCTCTACCCGGTGATCCTGATGTTCACCTCCCTGGCCATCGTCGCGTTCCT CCTGGGTTTCGTGGTGCCGGACGTGGTCAAGGTATTCATCGATTCCGGCCAGACCCTGCCGTTGCTAACGCGCGGCCTGA TCGCCCTCAGCGACCTGGTCAAGCACTGGGGCTGGCTGATGCTGCTGGTGCTGGTGGCGGCCTTCGTCGGTGCGCGCTGG GCACTGCGCGACCCGGATATCCGACTGCGCTGGCATGGGCTGGTATTGCGCATTCCACTGGTGGGGCGGTTGGTGCGCGC CACCGATACGGCGCGCTTCGCTTCCACCCTGGCGATCCTTACCCGCAGCGGGGTGCCCCTGGTCGAAGCCCTCGGCATCG GCGCCGAAGTGATCGCCAACCGGGTGATCCGCGCCCAGGTGGTGGTGGCCGCGCAGAAGGTCCGTGAAGGCGGCAGCCTG ACCCGCGCCCTGGAGGCCAGCGGGCAGTTCCCGCCGATGATGCTGCACATGATCGCCAGCGGCGAACGCTCCGGCGAACT GGACCAGATGCTCGCCCGCACCGCGCGCAACCAGGAAAACGACCTGGGGGCGCAGATCGCCCTGCTGGTCGGTCTTTTCG AACCGTTCATGCTGGTGGTCATGGGCGCGGTGGTGCTGATGATCGTGCTGGCCATCCTGCTGCCTATTCTTTCTCTCAAC CAACTCGTGGGGTAA Protein sequence : MAAFEYLALDSKGRQQKGVLEADSARQVRQLLRERQLAPLEVRATRVREQAERGRFSLVRGLSARDLALVTRQLATLVQA ALPIEEALRAAAAQSSSSRIQSMLLAVRARVLEGHSLASSLREFPSAFPELYRATVSAGEHAGHLGPVLEQLADYTEQRQ QSRQKIQLALLYPVILMFTSLAIVAFLLGFVVPDVVKVFIDSGQTLPLLTRGLIALSDLVKHWGWLMLLVLVAAFVGARW ALRDPDIRLRWHGLVLRIPLVGRLVRATDTARFASTLAILTRSGVPLVEALGIGAEVIANRVIRAQVVVAAQKVREGGSL TRALEASGQFPPMMLHMIASGERSGELDQMLARTARNQENDLGAQIALLVGLFEPFMLVVMGAVVLMIVLAILLPILSLN QLVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 2e-52 | 48 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-52 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| xcpS | YP_008102362.1 | type II secretion system protein XcpS | VFG0181 | Protein | 3e-118 | 84 |
| xcpS | YP_008102362.1 | type II secretion system protein XcpS | VFG2049 | Protein | 2e-52 | 46 |
| xcpS | YP_008102362.1 | type II secretion system protein XcpS | VFG1870 | Protein | 6e-58 | 43 |
