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Name : xcpR (PCA10_20240) Accession : YP_008102361.1 Strain : Pseudomonas resinovorans NBRC 106553 Genome accession: NC_021499 Putative virulence/resistance : Virulence Product : type II secretion system protein XcpR Function : - COG functional category : - COG ID : - EC number : - Position : 2202875 - 2204362 bp Length : 1488 bp Strand : + Note : - DNA sequence : ATGAACCCACCACTGGTTGAATCGCCCCTGCGACGGCTGCCCTTCGGCTTCGCCAAGCGACACGGCGTGTTGCTGATCGA CGGGACCGAGCCCTGCCTGGCCCACCGTCCCGGTGTCGAACTGGTGGCCCTGGCCGAGGCCAGGCGCTTCGCCGGCCGCA GCCTGCCGCTGCGCCCGCTCACGGGCGAGGCCTTCGACCAGGCCCTGGCCCTGGCCTATCAGCATGACTCCTCCGCGGCC ATGCAGCTGGCCGAGGACCTGGGCGGCAGCCTCGACCTCGCCGCCCTGGCCGAGCAGATTCCGGAAACCGAGGACTTGCT GGAGCAGGAGGACGACGCGCCGATCATCCGCCTGATCAACGCCATCCTCGGCGAGGCGATCAAGGAAAACGCCTCGGACA TCCACCTGGAAACCTTCGAGAAGCGGCTGGTGGTGCGCTTTCGCGTCGACGGCATCCTCCGCGAGGTGCTGGAACCCAAG CGCGAGCTGGCGGCGCTGCTGGTGTCGCGGATCAAGGTGATGGCGCGGCTGGACATCGCCGAAAAACGCATCCCCCAGGA CGGCCGCATTTCCCTGCGGGTGGCCGGACGGGAGGTCGATATCCGTGTCTCGACGTTGCCCTCGGCCAACGGCGAGCGCG TGGTGTTGCGCCTGCTGGACAAGCAGGCCGGGCGCCTGACCCTGCAGCACCTGGGCATGAGCGAGCGCGACCGGCATCTG CTGGAAGACACCGTGCGTCGTCCCCACGGCATCCTGCTGGTCACCGGGCCCACCGGCTCGGGCAAGACCACCACCCTCTA TGCCAGCCTGGTGACCCTCAACGACCGCACCCGCAACATCCTCACCGTCGAAGACCCCATCGAGTACCACATCGAGGGCA TCGGCCAGACCCAGGTCAACACCAAGGTCGACATGACCTTCGCCCGTGGCCTGCGCGCCATCCTGCGCCAGGACCCGGAC GTGGTGATGGTGGGCGAGATCCGCGACCAGGAAACCGCCGAGATCGCCGTCCAGGCATCGCTCACCGGTCACCTGGTGCT GTCGACCCTGCACACCAACAGCGCCATCGGCGCCATCACCCGCCTGGTGGACATGGGGGTCGAACCCTTCCTGCTGTCGT CGTCGTTGCTCGGCGTGCTGGCCCAGCGCCTGGTGCGGGTGCTCTGCCCGCATTGCAAGGAGGCCTACCAGGCCGATGCC GCCGAATGCCTGCTGCTGGGCGTGGAAGCCGACAGCGCACCGACCCTGCATCGCGCCCGTGGCTGCGGGCAATGCCACCA GCAGGGCTATCGCGGACGGACCGGGATCTACGAACTGGTGGTGTTCGACGACCACATGCGCAGCCTGATCCACAGCGTCG CCTCCGAGCAGGAAATGATCCGCCACGCGCGCCTGTCCAGCCCCAGCATCCGCGAGGACGGCCGACGCAAGGTGCTGCAA GGGGTCACCACGGTGGAAGAAGTGCTGCGGGTGACCCAGGAAGAATAA Protein sequence : MNPPLVESPLRRLPFGFAKRHGVLLIDGTEPCLAHRPGVELVALAEARRFAGRSLPLRPLTGEAFDQALALAYQHDSSAA MQLAEDLGGSLDLAALAEQIPETEDLLEQEDDAPIIRLINAILGEAIKENASDIHLETFEKRLVVRFRVDGILREVLEPK RELAALLVSRIKVMARLDIAEKRIPQDGRISLRVAGREVDIRVSTLPSANGERVVLRLLDKQAGRLTLQHLGMSERDRHL LEDTVRRPHGILLVTGPTGSGKTTTLYASLVTLNDRTRNILTVEDPIEYHIEGIGQTQVNTKVDMTFARGLRAILRQDPD VVMVGEIRDQETAEIAVQASLTGHLVLSTLHTNSAIGAITRLVDMGVEPFLLSSSLLGVLAQRLVRVLCPHCKEAYQADA AECLLLGVEADSAPTLHRARGCGQCHQQGYRGRTGIYELVVFDDHMRSLIHSVASEQEMIRHARLSSPSIREDGRRKVLQ GVTTVEEVLRVTQEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-134 | 64 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 8e-135 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| xcpR | YP_008102361.1 | type II secretion system protein XcpR | VFG0182 | Protein | 0.0 | 87 |
| xcpR | YP_008102361.1 | type II secretion system protein XcpR | VFG2048 | Protein | 7e-136 | 63 |
| xcpR | YP_008102361.1 | type II secretion system protein XcpR | VFG1876 | Protein | 3e-129 | 58 |
| xcpR | YP_008102361.1 | type II secretion system protein XcpR | VFG2426 | Protein | 3e-75 | 47 |
| xcpR | YP_008102361.1 | type II secretion system protein XcpR | VFG0233 | Protein | 1e-85 | 46 |
