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Name : wbpM (PCA10_19870) Accession : YP_008102324.1 Strain : Pseudomonas resinovorans NBRC 106553 Genome accession: NC_021499 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein WbpM Function : - COG functional category : - COG ID : - EC number : - Position : 2157365 - 2159368 bp Length : 2004 bp Strand : + Note : - DNA sequence : ATGTTACGTGAGCGATTACTGGGGCTGAGTCGACAGCGTAAGCGTATCCTTCAAGTGATTGCTGATGTGCTGCTCGTTTG GCTGGCATTATGGTTGGCGTTCGTGGTGCGCCTTGGGACAGACAGGCTTGTTGATCCTCTAGGCGGTCACGCGTGGCTGT TCGTCTGTGCGCCTCTGATTGCGATCCCTCTATTCGTTCGTTTGGGTATGTACCGTGCGGTGCTGCGTTACTTCGGAAAT GATGCGCTGGTAGGTATAGCTAAAGCCGTATCGCTTTCGGCTCTACTGCTAGCGCTGGCCGTTTACTGGTATCGCGACGC TCCTGAGGTTGTGCCGCGTTCGATTGTGTTCAATTACTGGTGGCTCAGCTTGGTACTCATTGGCGGCTTGCGCTTGGCAA TCCGCCAATACTTTCTGGGTGATTGGTATGTTGCCAGCCAGGCCATACCATTCGGTCCGAAAGATAACGGCCTGCCTCGC GTGGCGATCTATGGTGCGGGCGCTGCGGGTAATCAACTGGTCACTGCGTTGCGCATGGGGAGGGCCATGAGGCCCGTAGC ATTCATCGACGATGACAGCAGCATTGCTACGCGTACCATTAGCGGGCTTCAGGTGTACAAGCCCAAGCATATCCAGCAGA TGATCGATCAAACCGGTGCGCAGGAAGTGCTTCTGGCCATTCCCTCCGCAACTCGAGTTCGTCGTCGCGAGATTTTGGCC ACTCTGGAAGGCTATCCCCTGCATGTACGTAGCGTTCCAGGGTTCATGGACCTGGCCAGTGGCCGGGTCAAGGTTGATGA CATCCAGGAAGTCGATATCGCCGACCTGCTGGGTCGTGATGCGGTACCGCCGCGCAAGGAGCTGTTCGAGCGCTGCATCC AGAGCAAGGTAGTGATGGTCACCGGCGCCGGTGGTTCGATTGGTTCCGAGTTGTGCCGGCAGATCCTGGGGTGTGGGCCC AAGACGCTGATACTTTTCGAGCACAGCGAATTCAACCTCTACAACATCCAGATCGAACTTGAGCGGCGCATTGCGCGTGA ATCTCAAAGCGTTCAGCTGATCCCGATCCTCGGTTCCGTGAGGAACCTGGCGCGGTTGGTGGATGTGATGCGGACATGGG ATGTGGATACCGTGTATCACGCCGCCGCCTACAAGCATGTTCCCATCGTCGAGCACAATATTGCCGAAGGTGTGTTGAAC AACGTGATGGGCACTCTCTATACCGCACAGGCTGCAGTGCAGGCGGGCGTGGAGAATTTCGTGTTGATCTCCACGGACAA GGCGGTACGTCCGACCAACGTGATGGGCAGCACCAAGCGCCTGTCCGAAATGACCTTGCAGGCATTGAGTCGCGAGTCCG CTCCGGTGATGTATGGCGACAGCGAAGCGGTGCATCGGGTCAACAAGACCCGCTTTACCATGGTTCGCTTCGGCAACGTG CTGGGCTCTTCCGGCTCGGTGATCCCGCTTTTCCGTGAGCAGATCAAGCGTGGTGGGCCTATCACGGTTACCCACCCGAA TATCACGCGTTACTTCATGACCATCCCGGAAGCCGCACAGCTGGTGATCCAGGCGGGTTCCATGGGGCAGGGCGGTGATG TTTTCGTGCTGGACATGGGGCAGCCGGTGAAAATCGCCGAGCTTGCCGAGAAGATGGTCCACTTGTCCGGTCTGACCGTG CGTTCCGAGCGCAACCCCAGTGGCGACATCTCTATCGAGTTCACTGGATTGCGTCCGGGCGAGAAGCTCTATGAGGAGCT GTTGATCGGTGACAACGTCAGTCCGACCGAGCATCCGATGATCATGCGGGCCAACGAAGAGCATTTGTCCTGGGATGTCT ACAAGCGTGTTCTGGCCGAGTTGTTCGTTGCGGTAGAGAAGGATGACTACGTTCGTGTTCGTCAGCTCCTACGTGAAACC GTTAACGGTTACACCCCTGAAGAAGAAATTGTTGACTGGATCCATCAGCAGCGTCGGATTGAGCCTTCCAACTCCAGGCA CTAG Protein sequence : MLRERLLGLSRQRKRILQVIADVLLVWLALWLAFVVRLGTDRLVDPLGGHAWLFVCAPLIAIPLFVRLGMYRAVLRYFGN DALVGIAKAVSLSALLLALAVYWYRDAPEVVPRSIVFNYWWLSLVLIGGLRLAIRQYFLGDWYVASQAIPFGPKDNGLPR VAIYGAGAAGNQLVTALRMGRAMRPVAFIDDDSSIATRTISGLQVYKPKHIQQMIDQTGAQEVLLAIPSATRVRRREILA TLEGYPLHVRSVPGFMDLASGRVKVDDIQEVDIADLLGRDAVPPRKELFERCIQSKVVMVTGAGGSIGSELCRQILGCGP KTLILFEHSEFNLYNIQIELERRIARESQSVQLIPILGSVRNLARLVDVMRTWDVDTVYHAAAYKHVPIVEHNIAEGVLN NVMGTLYTAQAAVQAGVENFVLISTDKAVRPTNVMGSTKRLSEMTLQALSRESAPVMYGDSEAVHRVNKTRFTMVRFGNV LGSSGSVIPLFREQIKRGGPITVTHPNITRYFMTIPEAAQLVIQAGSMGQGGDVFVLDMGQPVKIAELAEKMVHLSGLTV RSERNPSGDISIEFTGLRPGEKLYEELLIGDNVSPTEHPMIMRANEEHLSWDVYKRVLAELFVAVEKDDYVRVRQLLRET VNGYTPEEEIVDWIHQQRRIEPSNSRH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 8e-83 | 41 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-77 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| wbpM | YP_008102324.1 | polysaccharide biosynthesis protein WbpM | VFG0029 | Protein | 2e-116 | 50 |
| wbpM | YP_008102324.1 | polysaccharide biosynthesis protein WbpM | VFG1300 | Protein | 5e-78 | 43 |
