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Name : clpV (PCA10_01590) Accession : YP_008100496.1 Strain : Pseudomonas resinovorans NBRC 106553 Genome accession: NC_021499 Putative virulence/resistance : Virulence Product : putative type VI secretion system ATPase Function : - COG functional category : - COG ID : - EC number : - Position : 175600 - 178248 bp Length : 2649 bp Strand : + Note : - DNA sequence : ATGGCCCAGAACTCCGCCAGCCTGCTTCGCCGCCTCAACCCCTACTGCGCCCGGGCGCTCGGTGCCGCGGCCTCGTTGTG CCAGAGCCGCGGCCATAGGCAGATCACCCTCGAACACTGGCTGCTCAAGCTGCTGGAGCAAGGGGAGGGAGACCTCACGC TCATCGCGCGTCGCTACGAGTGGGATCTCGATGCGCTCTGGCGTGCGCTGCTCGACCACCTGGACGGCCTGCCCCGCAGC GTGCATGACAAGCCCCAGCTTGGCGGCAAGCTCCAGCAACTGATCAAGAACGCCTGGCTGCGTGCCTCGCTCGACGATGA CAACGACAGGCTGCGCTCGCTGCACCTGCTCGGTGCCTTGCTGGAGTCGCCCAGCCTGCTCGAGTGCGAGGCTGCCTGGC CGTTGCTCAGCCTCACCGACGCCCAGTTGCAGCGCTTGGTGCCGCTGCTGGACCAGCACTCCGAGGAGCGCCCCGAGGTC CAACGCGAGGCTGGCCTCTCAGGGGACGAGCCCCGTGTCGCGCCACTGGCCGCTCCCTCCACCGGAACCGACGGTGCCCT GCAAGCGCTGCTCGACAAGTACACCCAGGACGTGACCGCCAAGGCGCGGGAGGGGCGTATCGATCCGGTGTTCGGACGCG ACGACGAAATCCGCCAGGTCATCGATATCCTGGGCCGGCGGCGCAAGAACAACCCCATCCTGGTCGGCGATCCCGGCGTC GGCAAGACCGCGCTGGTGGAGGGCCTGGCCCTGCGCATCGCCGAAGGCAACGTCCCCGACAGCCTGAAGCCCATGAGCGT GCGCACCCTCGACCTCGGCCTGCTGCAAGCCGGCGCAGGCGTCAAGGGCGAGTTCGAACAACGCCTGAAGCACATCATCG ATGCGGTGCAGCAAGCGCAACACCCCATCCTGCTGTTCATCGACGAGGCCCACACCCTGATCGGCGCCGGCAACCAGGCG GGGGGCGCCGATGCCGCCAACCTGCTGAAACCCGCGCTCGCCCGAGGCGAGCTGCGCACCATCGCCGCCACCACCTGGAG CGAGTACAAGCAGTACTTCGAGCGCGACGCGGCGCTGGAACGGCGCTTTCAGGTGGTCAAGGTCGACGAGCCCGACGACG CCAACGCCTGCCTCATGCTGCGCGGCCTCAAGGCCCGCTACGCCAGCCACCACGGCGTGCACATCGAGGACGGGGCGGTG CAGGCGGCGGTCAGCCTGTCGCGGCGCTACCTGACCGGCCGGCAACTGCCCGACAAGGCAGTCGACCTGCTGGATACCGC CAGTGCCCGGGTACGCATGAGCCTCGATTGCGAGCCCCAGGCGCTGGTTCGCATCAAGGCGAGCCAGGCCGCGCTGGAAC TGGAACAGCAGGCCCTGGAGGCCGACGCCCGCCTGGGCGGCAGGGCCCCTGCCGATCGGTTGGACGAAATCGCCGCCGAG CACGCCGAACTCGCGCGGCAGCGCGTGGAACTGGAGCGTCGCTATCGCCTCGAACTCGACCTGAGCCTGCAACTGCTCGA TGCGCGCCAGGAAGAGCCCCGCCAGCCGGAGCGCTGCGCCGAGCTGCAGCGGCGGCTGGAGGCGGCGCAGCGCGATCAGG CGCTGCTGTCCCTCGATGTCACCGCGCGCAACGTCGCCGAAGTGGTCGCCGACTGGACCGGGGTGCCCCTGGGCAGCCTG CTCAAGGACGAACAGGCCAGCCTGCTGGAGCTGGAGCGGCAGCTCGGCCAACGGGTCATCGGCCAGGATCACGCCCTCGG CGCCCTGGCCCAGCGCCTGCGCGCCGCACGCACCGGCCTGACCGATGAGAAGGCGCCCCAGGGGGTGTTCCTGCTGGTGG GCACCAGCGGCGTCGGCAAGACCGAAACCGCCCTGGCGCTGGCCGACAGCCTGTTCGGCGGCGAAAAATCGCTGATCACC CTGAACCTCTCCGAGTACCAGGAAGCCCACACCGTCAGCCAGCTCAAGGGCTCACCGCCGGGCTATGTCGGCTACGGCCA GGGCGGGGTGCTCACCGAAGCGGTACGCCAGCGGCCCTACAGCGTGGTGCTGCTCGACGAGGTGGAGAAGGCCCATCGCG ATGTGCTCAACCTGTTCTACCAGGTCTTCGACCGTGGCTTCATGCGCGATGGCGAAGGCCGCGAAATCGATTTCCGCAAC ACCGTCATCCTGATGACCTCCAACCTGGGCAGCGACCTGCTCGAGGCCTGCCTGCACGAACAACCCGACGCCACCGACGG CACCTTGCAGGAGCTGCTGCGCCCGGTCCTGCGCGAGCACTTCCAGCCGGCGCTGCTGGCGCGCTTCCAGACCCTGGTCT ACCGCCCACTGCAGGCCGACTCACTCAAGCGCATCGTCGACATCAAGCTCGCCCGGGTCGCCAGCCGCCTGCAGCGTCAC TACGGCCTGGGCTGCCACATCGACGACGCCCTCGGCGATGCCCTGGTTGCCGCCTGCCTGCTACCGGACAGCGGCGCCCG CAACATCGACAGCCTGCTCAACCAGCAGATCCTCCCGGTGCTCAGCCAGCAGCTCCTGCAACGCCAGGCCGTCCAGCAGG CTACCCGGGGTGTTTGCCTGGGCTACAGCCTTGAGGACGGCGTCACCCTGCACTTCACCGACCGGCTGGAACAGCCCGAG GAAGCCTGA Protein sequence : MAQNSASLLRRLNPYCARALGAAASLCQSRGHRQITLEHWLLKLLEQGEGDLTLIARRYEWDLDALWRALLDHLDGLPRS VHDKPQLGGKLQQLIKNAWLRASLDDDNDRLRSLHLLGALLESPSLLECEAAWPLLSLTDAQLQRLVPLLDQHSEERPEV QREAGLSGDEPRVAPLAAPSTGTDGALQALLDKYTQDVTAKAREGRIDPVFGRDDEIRQVIDILGRRRKNNPILVGDPGV GKTALVEGLALRIAEGNVPDSLKPMSVRTLDLGLLQAGAGVKGEFEQRLKHIIDAVQQAQHPILLFIDEAHTLIGAGNQA GGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQVVKVDEPDDANACLMLRGLKARYASHHGVHIEDGAV QAAVSLSRRYLTGRQLPDKAVDLLDTASARVRMSLDCEPQALVRIKASQAALELEQQALEADARLGGRAPADRLDEIAAE HAELARQRVELERRYRLELDLSLQLLDARQEEPRQPERCAELQRRLEAAQRDQALLSLDVTARNVAEVVADWTGVPLGSL LKDEQASLLELERQLGQRVIGQDHALGALAQRLRAARTGLTDEKAPQGVFLLVGTSGVGKTETALALADSLFGGEKSLIT LNLSEYQEAHTVSQLKGSPPGYVGYGQGGVLTEAVRQRPYSVVLLDEVEKAHRDVLNLFYQVFDRGFMRDGEGREIDFRN TVILMTSNLGSDLLEACLHEQPDATDGTLQELLRPVLREHFQPALLARFQTLVYRPLQADSLKRIVDIKLARVASRLQRH YGLGCHIDDALGDALVAACLLPDSGARNIDSLLNQQILPVLSQQLLQRQAVQQATRGVCLGYSLEDGVTLHFTDRLEQPE EA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 5e-123 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpV | YP_008100496.1 | putative type VI secretion system ATPase | VFG2084 | Protein | 1e-117 | 46 |
