Gene Information

Name : LRI_1952 (LRI_1952)
Accession : YP_008100252.1
Strain :
Genome accession: NC_021495
Putative virulence/resistance : Resistance
Product : transcriptional regulator CadC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4943 - 5293 bp
Length : 351 bp
Strand : +
Note : -

DNA sequence :
ATGAAAAGCAAAAGTGCTGACATTACTTGTGATCAGACATTGGTTGAGACAGATAAAGTAATGAAGGTCTCGGAATTCTT
GGGTAAATCACGTATTAAGAAATACTTTTATGTATTGTCTAAAATCTCAGATGAGAAAAAGTTAAAAATCATTTTCTCTT
TAATCGCTCAGGAATCGTTATGTGTTTGTGATATTGCATATATTTTAGGCTGTAGTATTGCAACCGCTTCTCATCACTTA
AGAATGCTGTATGATGCTGACATTTTAGACCGTCAAAAAAAGGGGAAAATGGTGTACTACTTTATAAAAGATGATGATCT
GAAAAAAATACTTGCTCAACTTGACAGGTGA

Protein sequence :
MKSKSADITCDQTLVETDKVMKVSEFLGKSRIKKYFYVLSKISDEKKLKIIFSLIAQESLCVCDIAYILGCSIATASHHL
RMLYDADILDRQKKGKMVYYFIKDDDLKKILAQLDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadX YP_254239.1 cadmium efflux system accessory protein CadX Not tested ¥ðSh1 Protein 3e-20 50
cadC YP_189777.1 CadC family transcriptional regulator Not tested vSe1 Protein 1e-21 50
cadX YP_252015.1 hypothetical protein Not tested SCCmec Protein 2e-17 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LRI_1952 YP_008100252.1 transcriptional regulator CadC BAC0059 Protein 2e-20 44