Gene Information

Name : LRI_0861 (LRI_0861)
Accession : YP_008099215.1
Strain : Lactobacillus reuteri I5007
Genome accession: NC_021494
Putative virulence/resistance : Unknown
Product : IstB ATP binding domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 870844 - 871470 bp
Length : 627 bp
Strand : -
Note : COG: COG1484

DNA sequence : 
ATGAATCAATATCAAAAATTAGTCGATAAGGAGATTACCTATCAGCAGCAAAAAAGCTTAAAGAGAAGAATCAAACGTGC
AAGATTTCCAATTATTAAGCTGCTCAGTGATTTTGATTATCAGTTCCAACCTTCAATTAATCAACAACAAATAGCTGAGT
TTGCGACGATGTCATTTCTGGATAATCAAGAGAACATCGTTTTTATTGGCAGCCCTGGCGTGGGTAAAACACATTTATCA
ATTGGCCTTGGCATCGAAGCGTGCCGACAAGACGTACGAACACTATTTATTAATTGCCATGAACTAATTCTTAGATTGAA
AGCAGCGCAGGGAAAGCAACACTTAGAGCGCGTAATGCGTCGATACGAAAGGTATGACCTGTTAATCATTGATGAATTAG
GCTATTTACCAATATCGGCGGAAGAAGCAAAACTATTATTTCAACTAATAAATGGTCGCTATGAACGTAAATCAACGATC
ATAACGACCAATGTACCATTATCAAGTTGGGGAGCCGTCCTCCACAGCACGGCAACCGCAGAGGCAATTTTAGATCGCCT
TGTATATCACTCACACGTAATTAAGATCAAAGGAAAGTCATATCGCTTGGCATCGGTCAATTCTTAA

Protein sequence : 
MNQYQKLVDKEITYQQQKSLKRRIKRARFPIIKLLSDFDYQFQPSINQQQIAEFATMSFLDNQENIVFIGSPGVGKTHLS
IGLGIEACRQDVRTLFINCHELILRLKAAQGKQHLERVMRRYERYDLLIIDELGYLPISAEEAKLLFQLINGRYERKSTI
ITTNVPLSSWGAVLHSTATAEAILDRLVYHSHVIKIKGKSYRLASVNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api84 CAF28558.1 putative transposase Not tested YAPI Protein 1e-35 43
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 2e-35 43
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 1e-35 43
unnamed CAA21402.1 - Not tested HPI Protein 2e-35 43
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 1e-35 43
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 1e-35 43
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 1e-35 43
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 1e-35 43
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 4e-34 42
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 3e-35 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LRI_0861 YP_008099215.1 IstB ATP binding domain-containing protein VFG1606 Protein 6e-36 43
LRI_0861 YP_008099215.1 IstB ATP binding domain-containing protein VFG1515 Protein 6e-36 43
LRI_0861 YP_008099215.1 IstB ATP binding domain-containing protein VFG1627 Protein 6e-36 43
LRI_0861 YP_008099215.1 IstB ATP binding domain-containing protein VFG1460 Protein 2e-34 42
LRI_0861 YP_008099215.1 IstB ATP binding domain-containing protein VFG1663 Protein 1e-35 42