Gene Information

Name : LRI_0567 (LRI_0567)
Accession : YP_008098921.1
Strain : Lactobacillus reuteri I5007
Genome accession: NC_021494
Putative virulence/resistance : Unknown
Product : Transposase, IS30 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 572578 - 573501 bp
Length : 924 bp
Strand : +
Note : COG: COG2826

DNA sequence :
ATGAGCACCACTATTTTATCATTCCAGAACCGTGTTGTCATTGAAACACTTCATAATGAAGGACGTTCCTTGCGATACAT
CGCTAACTACTTAGGCTTTAGTAAGACCACCATCTTTAACGAACTTCACCGGCTAAATAGTGAGTACCAGGCTGAGCTAG
CGCAAACTGACTTTGAACAAAAGGTTAGTCAACGGGGGCGGAAGTCTTCGCTCACTAAAAACCTTAAACACTTGGTCGAG
GAAAAGATTCAAGTCCAGAAGTGGTCCCCTGAACAAGTTGCCCATGTGGTTGGGATTGCCTACAAGACGGTCTATAACTG
GATTGATCAAGGCTGGCTTGATGTACAGCTACCCGATTTGCCTGATCATGGAATTCGTCGTCATCGTGCTAAAGAAAAGC
GTGGTACGTTCAGTCACGGCCGCTCCATTGAGGAGCGTCCTCATAAAGTCGAAACTCGCCAGGAGTTCGGCCACTTTGAA
GCTGATACCGTACTTTCTGGCAAACGTAAAGGTCAAGCTGTGGCTACTTTTGTGGAGCGTAAGAGTCGCCTGACAATTGT
TAAACGGCTCCATGGCCGCGACAGTCAGTCTATGACTCAAGCCGTACTTGAACTAGCTAGTCAACTTCAAGACAAGCTCA
AGACGCTGACCGTGGATCATGGGAAAGAGTTCGCTAACTATCAGACAATTGAACGGCAAACTGGTACTCCGGTTTATTTT
GCCCATGCTTATTCACCACATGAACGCGGTAGTAATGAGAACCGTAATCGAGTTTTACGGCGCTTTATTCCCAAGGGACA
AGCTATTGAAGAGCTGAGCGATCGCCAGCTGGTTCAAATCAATTGGTATCTGAATTCCCGGCCACTTAAATGTCTTAATT
GGCATACACCAATCGAGATCTTCCTGCTTAATCTACGTCATTAA

Protein sequence :
MSTTILSFQNRVVIETLHNEGRSLRYIANYLGFSKTTIFNELHRLNSEYQAELAQTDFEQKVSQRGRKSSLTKNLKHLVE
EKIQVQKWSPEQVAHVVGIAYKTVYNWIDQGWLDVQLPDLPDHGIRRHRAKEKRGTFSHGRSIEERPHKVETRQEFGHFE
ADTVLSGKRKGQAVATFVERKSRLTIVKRLHGRDSQSMTQAVLELASQLQDKLKTLTVDHGKEFANYQTIERQTGTPVYF
AHAYSPHERGSNENRNRVLRRFIPKGQAIEELSDRQLVQINWYLNSRPLKCLNWHTPIEIFLLNLRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0085 YP_039551.1 transposase Not tested Type-II SCCmec Protein 9e-43 41
unnamed BAC67550.1 putative transposase Not tested Type-IVc SCCmec Protein 6e-43 41