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Name : LRI_0480 (LRI_0480) Accession : YP_008098834.1 Strain : Lactobacillus reuteri I5007 Genome accession: NC_021494 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpC Function : - COG functional category : - COG ID : - EC number : - Position : 493519 - 496011 bp Length : 2493 bp Strand : + Note : COG: COG0542 DNA sequence : ATGGATAATATGTTCACGCCAAGTGCAAAGCATGTTCTAGCAATTGCACAAGAACAAGCAAAATACTTTAAACACCAAGC AGTAGGGACTGAACACCTTCTACTTGCCCTCTCAATGGATAAAGATGGGATTGCTAATAAAATATTCGAACAATTTTCTA TTACAAACGATGATATTCGTGAAGAAATTGAACGCTTAATTGGCTATGGAACGATGGAAAATCTGGGAGCTTCAGATTAT CTTCCGTACTCACCAAAAGCAAAGCAAGTATTATCGTTAGCAGGTAAAGAAGCCCAACAAATGCATGCATTGAAGATTGG CACTGAACACTTATTATTAGCCTTAATCGCTGATGAAAGTGTCCTATCTTCACGGATTTTATATAGTCTAGATGTTGTGC CACGACAGATGAGAAAAGTAATCTTACGGCGGTTAGGGATTGCTGATAGTCAGCAACGCAATTCTAGCCGTCAATCGTCT CGTCGGCGGGTCCAACAAACTGGTACACCAACATTAGATAAGCTAGCTCGTGATATGACAGAACTTGCTCGGAATGGCCA GCTTGATCCTGTAATTGGTCGAAATAAGGAAGTTAAACGTGTGGAGCAGATTCTTAGTCGTCGTACCAAGAACAATCCTG TGCTGATCGGCGAACCTGGTGTAGGAAAGACAGCGATTGCTGAAGGGCTTGCTCAGCGGATTGTTGAGGGAAAAGTCCCA GCTGAATTAGCTAATAAACGTTTGATGATGCTAGATATGGGATCATTAGTTGCGGGAACTAAGTATCGAGGAGAATTTGA AGATCGCCTTAAGAAAGTGATTGATGAAATTCAAAACGATGGGCATGTGATTCTTTTTATTGATGAACTCCATACCTTAA TTGGTGCTGGTGGCGCTGAAGGGGCAATTGATGCATCTAATATTTTGAAACCAGCCTTAGCACGAGGCGAGCTGCAAACA ATTGGTGCTACTACCCTTGACGAATATCAGAAATATATAGAATCGGATGCGGCACTTGAACGACGCTTTGCTACTGTTCA AGTTGATGAGCCGACTACTGACCAAACCCTGCAAATTCTGCGAGGACTACGACCGAAGTATGAGGAGCACCACCATGCTA AGATTACTGATGAAGCGCTGGAAGAAGCAGTTAAATTGTCGGATCGTTATATTTCAGATCGTTTCTTGCCGGATAAAGCA ATTGATCTTATTGATGAATCGGCAGCTATGGTTCGGATTGATGCTGAAGATAAGAAAAATCATCAGCCTTCATTAGAAAG TCAGTTAGAAGATTTACGAACCCAAAAAGAAGAAGCAATTGATAATCAAGACTTTGATCGTGCAGCTACTCTTCGTCAAC AAGAATTAGCACTAAAAGATAAGATTGATCGCAAAAAGCAACGCACTCAACAAAAGGATTCTCATAACTATAAATTGAAA GTAACTGGTGAAAACATTGCACAAGTTGTTGCTGAATGGACAGGAGTTCCTTTAACTCAATTGAAGAAAAGCGAGAGTGA ACGATTGGTTAACTTGGAAAAGGTTCTGCACCAACGAGTAATTGGTCAAGATGAAGCAGTTACCGTAGTCGCTAAAGCAA TTCGGCGTGCACGAAGCGGTCTTAAGGATCCTAGTCGGCCGATTGGTTCCTTTATGTTTTTAGGACCAACTGGGGTAGGA AAAACAGAGCTTGCCAAGGCATTAGCCGCTGCAATGTTTGGCTCGGAAGATAATATGATCCGGATTGATATGTCAGAATA TATGGAAAAATATAGTACTAGTCGCTTGATTGGTGCTGCTCCAGGATATGTCGGCTATGACGAGGGTGGCCAATTAACTG AAAAAGTACGGCAACATCCATATTCAGTTGTCTTATTAGATGAAGCTGAAAAGGCACATCCGGATGTATTTAATTTATTA CTTCAAGTTTTAGATGATGGTTACTTAACTGATGCGAAAGGTCGGCGCGTTGATTTTAGAAATACCATTATTATTATGAC TTCTAACCTTGGAGCAACTCAGCTTCAGGATGAGAAAGAGGTTGGTTTTGGGGCAAAAGATATGTCACAGGACTATAATG CGATGGCGGCGGCGATTAAGCAACAAATGAGGTTATACTTCCGCCCAGAATTTCTTAATCGGATTGATGAAACGATTATC TTCCATTCATTACAAAAGAAAGAACTTCATCAAATTGTTAAACTCATGGTTAATGATTTAAATAAGCGGGTAAGTGAGCA AGGTATTAACTTGAAAGTTACGCCTGCTGCAATTGATGTGATCGCAAAGCTTGGTTACAATCCCGCTTATGGAGCTCGTC CGCTTCGTCGTGCTTTACAAGATCATGTTGAGGATGATTTGAGTACTGGACTGCTTAGTGGTGAAATCAATGTGGGGGAT GACGTAACAGTAGGTGCGCATCAAGGTAAAATTACTTTTAAAGTAAAAAAGCCAGATGAAGATAAAGCAGTTGAATTAAA ATTAAATAAATAA Protein sequence : MDNMFTPSAKHVLAIAQEQAKYFKHQAVGTEHLLLALSMDKDGIANKIFEQFSITNDDIREEIERLIGYGTMENLGASDY LPYSPKAKQVLSLAGKEAQQMHALKIGTEHLLLALIADESVLSSRILYSLDVVPRQMRKVILRRLGIADSQQRNSSRQSS RRRVQQTGTPTLDKLARDMTELARNGQLDPVIGRNKEVKRVEQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVEGKVP AELANKRLMMLDMGSLVAGTKYRGEFEDRLKKVIDEIQNDGHVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQT IGATTLDEYQKYIESDAALERRFATVQVDEPTTDQTLQILRGLRPKYEEHHHAKITDEALEEAVKLSDRYISDRFLPDKA IDLIDESAAMVRIDAEDKKNHQPSLESQLEDLRTQKEEAIDNQDFDRAATLRQQELALKDKIDRKKQRTQQKDSHNYKLK VTGENIAQVVAEWTGVPLTQLKKSESERLVNLEKVLHQRVIGQDEAVTVVAKAIRRARSGLKDPSRPIGSFMFLGPTGVG KTELAKALAAAMFGSEDNMIRIDMSEYMEKYSTSRLIGAAPGYVGYDEGGQLTEKVRQHPYSVVLLDEAEKAHPDVFNLL LQVLDDGYLTDAKGRRVDFRNTIIIMTSNLGATQLQDEKEVGFGAKDMSQDYNAMAAAIKQQMRLYFRPEFLNRIDETII FHSLQKKELHQIVKLMVNDLNKRVSEQGINLKVTPAAIDVIAKLGYNPAYGARPLRRALQDHVEDDLSTGLLSGEINVGD DVTVGAHQGKITFKVKKPDEDKAVELKLNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 49 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 4e-94 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LRI_0480 | YP_008098834.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 59 |
| LRI_0480 | YP_008098834.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0080 | Protein | 9e-158 | 52 |
