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Name : LRI_0208 (LRI_0208) Accession : YP_008098562.1 Strain : Lactobacillus reuteri I5007 Genome accession: NC_021494 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : - COG ID : - EC number : - Position : 213007 - 214527 bp Length : 1521 bp Strand : + Note : COG: COG3666 DNA sequence : ATGTATCAAAATTATACCATAGGGCAAACCGAATTCGTACTAAACTATAACTATGATTTACCACAAAATCATATTGCGCG GCTAATTAGTGATTTTGTCGACTCGATTCCACAAAATGTGCTATTAGAAGATTCAGGAGCGGCTACCGGCCGCCCTTCAT CGCATCCAGCAATTATGCTTAAGATTCTCTTGTTTGCCTACGCACGTCAAACTTATTCTGGAAGAAAGATTGAAATGATG TTGGATGAGAACCTGCCAATGCGTTGGTTAGCTCATGATTATACTTATAGCTACCATACCATCAATAACTTTCGCCGCAG TCAGCACGCTAGTAAGCTAATTAAACATGCCTTTGTCTACTTTACCATGACTTTGAAAGATCACGGACTAATTCAAAATG ATGCAGTTTTTATCGATGGGACCAAGGTAGAAGCCGATACCAATAAATATTCATTTACTTGGCGACGGGCAGTTGAAAAG TATCACGCTAAGTTAAGAGAAAAGACAAGTAAGCTTTATGAGGAACTAGTAGAAAAGCAAGTGGTGCAAGAAATGGCACC GGAGCTGGTTACTTCCGCCGAAGGCATAGACGTAATGGAACAAGAACTGGCGGAGAAAATCACTAAGCTAGATGAAGAGA TTAAGCAAGAACCAAAAATCATCAAAGGTGGTTCAGTGAGAAAACGGCGCCGTCGTTTTCTAAAAAAGCTTCGTCACCAA TTAAGCAACGACCTAATTCCGCGTGCCAAAAAGTATGAACGTGCTGAAAATATCTTCCAAGGTCGTAATAGCTATTCCAA AACTGACCACGATGCGACCTTCATGTGTATGAAGGAAGAACCGATGATGAATCGGGAGTTGAAGCCTGGCTATAACCTGC AAATCGCTACCTATAAGCAATTTGTGCTTGATTACGGGCTGTTTTCAAATCCAACTGACACCAGGACCTTAGTGCCATTC CTTACCCAGTTTCATGCTTTAGATTTCTTTGAACATATCGTCGCCGATGCAGGCTATGGAAGTGAGTACAATTACACAAT GATTCTTGATCGGTTTGAAAAGCAGCCGGTTATCCCATACACCACCTATCAAAAGGAACAGAAACGTAAATTTAAAAACG ATCCAACTAAATCACAAAATTGGGAATATAACGCTAAGGACGACTACTACATTGATCATCAAGGAGTTCGTTTTAGTTTT TATCGCTACAGTAAATCTACTGATAAGTACGGCTTTAAGCGCGACTTTAAAATCTATCGTGCTGATAAACATCAACTATC AGTCAAATTAGATGAGCTAGCGAAGACACCAGGTGGTCGTCAACGCTATATGAAGGTTAATCCAACCTGGAATTATTATA AAGCTAAAGTTAAAGATGCCCTCTCAAGTGACGAAGGCAAGGCAATTTATCGTCGACGGAAGTTCGACGTTGAGCCAGTC TTTGGTCACATGAAGAGGGATTTTGGCATACGCCGAACTCATCTCCGTGGCCAACGGGCTGTGGAAAATGACATTGGCTA G Protein sequence : MYQNYTIGQTEFVLNYNYDLPQNHIARLISDFVDSIPQNVLLEDSGAATGRPSSHPAIMLKILLFAYARQTYSGRKIEMM LDENLPMRWLAHDYTYSYHTINNFRRSQHASKLIKHAFVYFTMTLKDHGLIQNDAVFIDGTKVEADTNKYSFTWRRAVEK YHAKLREKTSKLYEELVEKQVVQEMAPELVTSAEGIDVMEQELAEKITKLDEEIKQEPKIIKGGSVRKRRRRFLKKLRHQ LSNDLIPRAKKYERAENIFQGRNSYSKTDHDATFMCMKEEPMMNRELKPGYNLQIATYKQFVLDYGLFSNPTDTRTLVPF LTQFHALDFFEHIVADAGYGSEYNYTMILDRFEKQPVIPYTTYQKEQKRKFKNDPTKSQNWEYNAKDDYYIDHQGVRFSF YRYSKSTDKYGFKRDFKIYRADKHQLSVKLDELAKTPGGRQRYMKVNPTWNYYKAKVKDALSSDEGKAIYRRRKFDVEPV FGHMKRDFGIRRTHLRGQRAVENDIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | BAC67565.1 | hypothetical protein | Not tested | Type-IVc SCCmec | Protein | 2e-69 | 43 |
| SAMSHR1132_00350 | YP_005324559.1 | putative transposase | Not tested | Type-IIIinv SCCmec | Protein | 1e-81 | 42 |
| MW0034 | NP_644849.1 | hypothetical protein | Not tested | Type-IV SCCmec | Protein | 1e-81 | 42 |
| unnamed | BAA86649.1 | hypothetical protein | Not tested | Type-I SCCmec | Protein | 1e-81 | 42 |
| SAUSA300_0034 | YP_492755.1 | IS1272, transposase | Not tested | Type-IV SCCmec | Protein | 2e-79 | 42 |
| SACOL0036 | YP_184947.1 | IS1272 transposase | Not tested | Type-I SCCmec | Protein | 1e-81 | 42 |
| tnp | YP_254534.1 | IS1272 transposase | Not tested | ¥ðSh2 | Protein | 4e-75 | 41 |
