Gene Information

Name : LRI_0179 (LRI_0179)
Accession : YP_008098533.1
Strain : Lactobacillus reuteri I5007
Genome accession: NC_021494
Putative virulence/resistance : Resistance
Product : peptide ABC transporter ATP-binding component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 180277 - 180963 bp
Length : 687 bp
Strand : +
Note : COG: COG1136

DNA sequence :

ATGTCAAAATTGAAGTTAGTAGATGTTAACAAATATTATGGCGAAGGAATTAGCCGTGTTCATGTTCTCAAAGATATTAA
TTTTTCTGCTAAAGCGGGAGAATTAAATTTGATTTTAGGGCCTTCTGGATCAGGAAAGAGTACTTTTTTAACAATTGCGG
GCGGCTTACAAACACCTACCTCAGGAAAAGTGTTGATTGACGGGATTGATATTGAAAAGCTGTCTTCTAAAAAGCGTGAT
GAACTGCGCTTGCAGAAAATTGGCTTTATCCTTCAGTCCTATAACCTATTACCCTATCTAAATGTGGCGGATCAATTTAA
ACTTGTTGATCGCATAAAGAAGAGGGGGAACGTTTCATCGGAAGCCTTTAATGAATTATTGGAAAAGCTTGCGATAAAAA
AGCTGCTCAAACAATATCCTTCTGAGTTGTCAGGAGGTCAAAACCAGCGGGTAGCGATTGCGCGTGCCCTTTATACTGAT
CCTGAGATAATTCTTGCAGACGAGCCAACAGCGGCCTTAGATAGTAATTTAGTAAAGATAGTTGGGCAATTATTTCATGA
TCTAGCTAAAAAGAGAAACAAAGCGGTGATTGCTGTAACCCATGATTTACGTTTACGTGAATATGCAGATAATGTTTACG
AGTTAGCTGATGGGAAGCTGAAATTAAGTGAAAAAGCCTCAGACTAA

Protein sequence :

MSKLKLVDVNKYYGEGISRVHVLKDINFSAKAGELNLILGPSGSGKSTFLTIAGGLQTPTSGKVLIDGIDIEKLSSKKRD
ELRLQKIGFILQSYNLLPYLNVADQFKLVDRIKKRGNVSSEAFNELLEKLAIKKLLKQYPSELSGGQNQRVAIARALYTD
PEIILADEPTAALDSNLVKIVGQLFHDLAKKRNKAVIAVTHDLRLREYADNVYELADGKLKLSEKASD

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAP55232.1	unknown	Not tested	SaPIbov2	Protein	1e-38	46
SARLGA251_00480	YP_005754062.1	ABC-type transport system ATPase	Not tested	Type-XI SCCmec	Protein	2e-38	45

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
LRI_0179	YP_008098533.1	peptide ABC transporter ATP-binding component	CP001581.1.gene798.p	Protein	2e-27	42
LRI_0179	YP_008098533.1	peptide ABC transporter ATP-binding component	NC_012469.1.7686878.	Protein	3e-26	42
LRI_0179	YP_008098533.1	peptide ABC transporter ATP-binding component	CP001581.1.gene598.p	Protein	5e-26	41