Gene Information

Name : LRI_1646 (LRI_1646)
Accession : YP_008100000.1
Strain : Lactobacillus reuteri I5007
Genome accession: NC_021494
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase
Function : -
COG functional category : -
COG ID : -
EC number : 4.4.1.8
Position : 1682097 - 1683239 bp
Length : 1143 bp
Strand : -
Note : COG: COG0626

DNA sequence :
ATGAAATTCAACACCCAATTAATTCATGGCGGTAATAGTGAGGATCCAACAACTGGTGCCGTTTCAACACCAATCTACCG
TTCATCAACATTCCACCAACACGTTCTTGGCGGTGAACCTAAATGGGAATATTCTCGAACAGGAAATCCAACACGTGTAT
CTCTTGAAAAATTAATCGCAGAGCTTGAACATGGGACAGTCGGCTTTGCATTTGCTTCTGGATCTGCTGCTATTCATGCT
ACTTTTTCTCTATTCTCGCAAGGCGATCATTTTGTAGTTGGTAGTGATGTATATGGGGGAACATTCCGGTTAATCAATAA
GGTATTAAAACGCTTTGGCTTTGAATTTACTGTTGTTGATATGCAAGACCTTGAAGCAGTAGAAAATGCAATTCAAGATA
ATACCGTTGCAGTTTACTTTGAAACACCGACTAATCCGCTCTTACAAATCGCTGATATTAAAGCAATTGCCGATATCGCA
AAGAAGCATGGAGTAAAGACAATTGTTGATAATACCTTTGCCACTCCTTATAATCAACAACCATTAACTCTCGGGGCGGA
TATTGTTGTTCACTCCGCAACAAAATATTTAGGCGGTCATAGTGATGTTGTTGCCGGATTAGCAGTTACTAACGATGATG
AAATTGCTGAACAATTAGCATTCCTGCAAAACTCAATCGGTAGTACGCTTGGTCCTGACGATAGTTGGCTATTACAACGG
GGGATGAAAACTCTCGGTGCCCGGATGCGAGTTCACCAAGAAAATGCGAATGAAGTTATTGACTTCCTCCAAAATGATGA
CCACATTGGAAAAATTTATTATCCAGGCTTAAAAGATTTCCCTGGTCATGAGGTTGCAGCTAAGCAAATGCGGAACTTTG
GAGCAATGATCTCCTTTGAACTTAAGGATAGTTTAGATGCGAAGAAGTTTGTTGAAAGTCTACAATTGATTGATCTTGCC
GAAAGTTTGGGGGGAATTGAAAGTTTGATTGAAGTTCCAGCTGTCATGACTCATGGATCTATTCCCCGGGAAATACGATT
AGAAAACGGAATTAAAGATGAGTTGATTCGTCTTTCAGTGGGAATTGAGGACCCTGAAGATATTATTGCTGACTTGCAAC
AAGCACTTAAAAAATTAGATTAA

Protein sequence :
MKFNTQLIHGGNSEDPTTGAVSTPIYRSSTFHQHVLGGEPKWEYSRTGNPTRVSLEKLIAELEHGTVGFAFASGSAAIHA
TFSLFSQGDHFVVGSDVYGGTFRLINKVLKRFGFEFTVVDMQDLEAVENAIQDNTVAVYFETPTNPLLQIADIKAIADIA
KKHGVKTIVDNTFATPYNQQPLTLGADIVVHSATKYLGGHSDVVAGLAVTNDDEIAEQLAFLQNSIGSTLGPDDSWLLQR
GMKTLGARMRVHQENANEVIDFLQNDDHIGKIYYPGLKDFPGHEVAAKQMRNFGAMISFELKDSLDAKKFVESLQLIDLA
ESLGGIESLIEVPAVMTHGSIPREIRLENGIKDELIRLSVGIEDPEDIIADLQQALKKLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-84 52
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-85 52
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-69 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LRI_1646 YP_008100000.1 cystathionine beta-lyase BAC0207 Protein 4e-65 45