Gene Information

Name : LRI_1204 (LRI_1204)
Accession : YP_008099558.1
Strain : Lactobacillus reuteri I5007
Genome accession: NC_021494
Putative virulence/resistance : Unknown
Product : Transposase, IS30 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1228073 - 1228996 bp
Length : 924 bp
Strand : -
Note : COG: COG2826

DNA sequence :
ATGGGCACCACTATTTTATCATTCCAGAACCGCGTTGTCATTGAAACGCTTCATAATGAAGGACGTTCCTTGCGATACAT
CGCTAACTACTTAGGCTTTAGTAAGACCACGATTTTTAACGAACTTCACCGACTAAATGGTGAGTATCAGGCTGAGCTAG
CGCAATCTGACTTCGAACGAAAGGTTGGTCAACGGGGGCGGAAGTCTTCGCTCACTAAAAACCTTAAACACTTGATCGAG
GAAAAGATTCAAACCCAGAAATGGTCACCTGAACAAGTTGCCCATGTGGTTGGGATTGCCTACAAGACGGTTTATAACTG
GATTGATCAAGGATTGCTTGATGTGCAGTTACCCGATTTGCCTGATCATGGAATTCGTCGCCATCGCGCTAAAGAAAAGC
GTGGGACGTTCAGTCACGGCCGCTCAATTGAGGAGCGGCCTCATAAAATCGAAACTCGCCAGGAATTTGGTCACTTTGAA
GCTGACACCGTGCTTTCTGGCAAACGTAAAGGCCAAGCCGTCGCAACCTTCGTGGAGCGTAAGAGTCGCTTGACGATTGT
TAAACGGCTCCATGGTCGCGACAGTCAGTCCATGACTCAAGCCGTACTGGAACTAGCTAGTCAACTTCAAGACAAGCTAA
AAACGCTTACTGTGGATCATGGTAAAGAGTTCGCTAATTACCAGGCAATTGAGCAGCTAACTGGTACTCAGGTTTATTTT
GCCCATGCTTATTCACCACATGAACGAGGCAGTAATGAGAACCGTAACCGAGTTTTGCGACGGTTTATTCCCAAGGGACA
AGCCATTGAAGAACTAAGTGATTACCAACTGGTTCAAATCAATTGGTATCTGAATTCACGGCCACTTAAATGTCTTAATT
GGCATACACCAATCGAGATCTTCTTGCTTAATCTGCGTCACTAA

Protein sequence :
MGTTILSFQNRVVIETLHNEGRSLRYIANYLGFSKTTIFNELHRLNGEYQAELAQSDFERKVGQRGRKSSLTKNLKHLIE
EKIQTQKWSPEQVAHVVGIAYKTVYNWIDQGLLDVQLPDLPDHGIRRHRAKEKRGTFSHGRSIEERPHKIETRQEFGHFE
ADTVLSGKRKGQAVATFVERKSRLTIVKRLHGRDSQSMTQAVLELASQLQDKLKTLTVDHGKEFANYQAIEQLTGTQVYF
AHAYSPHERGSNENRNRVLRRFIPKGQAIEELSDYQLVQINWYLNSRPLKCLNWHTPIEIFLLNLRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0085 YP_039551.1 transposase Not tested Type-II SCCmec Protein 8e-44 41
unnamed BAC67550.1 putative transposase Not tested Type-IVc SCCmec Protein 6e-44 41