Gene Information

Name : LRI_1103 (LRI_1103)
Accession : YP_008099457.1
Strain : Lactobacillus reuteri I5007
Genome accession: NC_021494
Putative virulence/resistance : Unknown
Product : N-6 DNA methylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1123553 - 1125085 bp
Length : 1533 bp
Strand : -
Note : COG: COG0286

DNA sequence :
TTGGCAACTAAGTCTAAAGAGCTAAATATTGAAGATAAATTATGGAAGGCTGCTGATGCATTACGTGGAAGCATGGATGC
ATCAGAATATCGTAATGTTGTATTAGGATTAATTTTTCTTAAGTATGCGTCGGATTCCTTTGATGAAAGAAGACAAGAGC
TTTTAAAAACAGAATATCCTGAAGATGCAGAAGATCCAGACATGTATCTAGAAAATAACATTTTCTGGGTTCCTCAAGAG
GCTCGTTGGTCAAAAATAGAACATGCTGCTAAAACACCTCAAATTGGTGAAGTGATTGATGATGCAATGACTGCAATTGA
AAAGAGCAATGATTCATTTCGAGGGATTTTGAGTAAAAATTATGCTTCACCAGATCTTGATAAAACACGCTTGGGTGAAG
TAGTCGATTTAATTTCAGACATTAAGGTTGGAACTAAAGAATCTACAGATAAAGATGTTTTAGGTCGTGTTTACGAATAT
TTCTTAAATGAATTTGCTAGTCAAGAGGGTAAACACGGTGGTGAGTTCTATACACCACGGTCAATTGTTAAAATCTTAGT
TGAAATGATTGAGCCTTATAAAGGACGAATTTATGATCCTTGTTGTGGTTCAGGTGGAATGTTTGTTCAATCAGAAGAGT
TCGTTCGTCACCATCAAGGAGAGTTGAAGGATCTTCATGTATTTGGTGAGGAATCTAACCCAACTACTTGGAAATTAGCT
AAGATGAACTTAGCAATTAGAGGAATTGATAGTGATTTAGGTCCCCACCAAGGTGACACTTTCACTAATGATTTACATAA
AGGTGTTCGTTTTAACTACATTTTGGCTAATCCACCATTCAACATTAAAAACTGGGGCGGCGAAAAGCTTCAAGAAGATG
CTAGATGGAAATATGGTGTTCCACCAACAGGAAATGCAAATTATGCCTGGATTGAACATATTATTAGTAAGTTAGCACCG
GATGGGAAAGCAGGCTTTGTTTTAGCTAACGGTGCCTTATCGACTTCTAATAAAGAAGAGCTTGCTATTCGTAAAGCAAT
TTTAGAGGATGATAAGATTGACGCAATTGTTGCCTTACCTGAAAAAATGTTTTATTCGACAGGAATTCCAGTTTCATTAT
GGTTTGTTGACATGAATAAGGAATCTGAGGATGAACGCTCGCGAAAGGGTGAAACATTATTTATTGATGCACGTAATTTG
GGTGAGATGATTGATCGAACTCATCGTGCATTTAATGATGATGACATTAAAAAAGTAGCGGATACTTACCATGCTTACCG
TGGTACAAATGATCAAGAATATAAAGATGTTGCCGGCTTTTGTAAGGTTGCTAAGTTAGATGAGATTGCTAAAAACGATT
ATGTATTAACACCAGGTCGCTATGTTGGCCTTGCAAAACAAGAAGATGACGGCGAACCTTACGAAGTTAAAATGAAGAGA
CTAACTAGTGAATTAAAAGAACAATTTGAGGAAAGTAATAAGTTACAAGCTCAAATTAAAGATGTATTGAAGGAGCTTGG
ATATGAAATATAA

Protein sequence :
MATKSKELNIEDKLWKAADALRGSMDASEYRNVVLGLIFLKYASDSFDERRQELLKTEYPEDAEDPDMYLENNIFWVPQE
ARWSKIEHAAKTPQIGEVIDDAMTAIEKSNDSFRGILSKNYASPDLDKTRLGEVVDLISDIKVGTKESTDKDVLGRVYEY
FLNEFASQEGKHGGEFYTPRSIVKILVEMIEPYKGRIYDPCCGSGGMFVQSEEFVRHHQGELKDLHVFGEESNPTTWKLA
KMNLAIRGIDSDLGPHQGDTFTNDLHKGVRFNYILANPPFNIKNWGGEKLQEDARWKYGVPPTGNANYAWIEHIISKLAP
DGKAGFVLANGALSTSNKEELAIRKAILEDDKIDAIVALPEKMFYSTGIPVSLWFVDMNKESEDERSRKGETLFIDARNL
GEMIDRTHRAFNDDDIKKVADTYHAYRGTNDQEYKDVAGFCKVAKLDEIAKNDYVLTPGRYVGLAKQEDDGEPYEVKMKR
LTSELKEQFEESNKLQAQIKDVLKELGYEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hsdM BAD24842.1 HsdM protein Not tested Type-V SCCmec Protein 3e-168 65
hsdM YP_251979.1 type I restriction-modification system DNA methylase Not tested SCCmec Protein 3e-168 64
hsdM BAH57701.1 type I restriction-modification system DNA methylase Not tested Type-VII SCCmec Protein 1e-168 64
api49 CAF28523.1 putative HsdM-like N-methyl transferase Not tested YAPI Protein 1e-116 45