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Name : LRI_1098 (LRI_1098) Accession : YP_008099452.1 Strain : Lactobacillus reuteri I5007 Genome accession: NC_021494 Putative virulence/resistance : Unknown Product : HsdR family type I site-specific deoxyribonuclease Function : - COG functional category : - COG ID : - EC number : - Position : 1117008 - 1120133 bp Length : 3126 bp Strand : - Note : COG: COG0610 DNA sequence : GTGGCAAGTTATCTTAACGAAGAAAATATCGAGGGCATTGCTTTAAGATGTCTTGATGAAGTAGGCTATCAAGTCTACAA AAGTGCTAGTTATACTAGTCCGAATGTAGAAATAGATGCTGAAAGAAATAATGACCATACACAACCTATTTTAAAAGGAC AATTAGAAAACGCCTTACGCAAGTTAAATCCTGGACTTGATGATGAAGTATACCGTAATGCTATTCATCAATTCGAGATG CTAGCAGATAGCCCAGATATGATGCTTAATAATCATAAGCTTCATGAATTAATTATCGGCGGAGCAAAAGTAAAAACATC AATTAAAGGTGAAGATCGGACTATTACTTTGTATCCGATTGATTTTAAGAACGTTGATAGCAATACTTTTGTTGCGACAA ATCAATTTACAATGAAACAGGGAGAACATGAAAGAAGACCAGACATTACTCTTTTTATTAATGGGCTTCCTTTAGTTACC TTTGAATTAAAGAACCCAGCAAATGCGAATGTAGGTATTCAACAAGCTTTTGCCCAATTTTCTACTTATAAAGAAGAGAT ATCTTCTTATATGCAATATAACGAAATTTTAATTGTTTCTGATGGAATTAATGCGCGAGCTGGGTCATTAACAGCAGGAA TTGATCGCTTTATGCGGTGGCGCGAGCCGAAAAATGTAGATATTGACGATTCAATGATGGAATTAGAAGTATTGATAAAA TACATGCTTACCCCATCTGATTTATTAAACATCATTCAGAATTTTATTCTTTTTGAAAGTGATGGAGACAAGACAATCAA GATTTTAGCAGCATATCATCAATATTATATGGTTAATAAAGCTGTAAAAAGAACATCAAAAGTATTGGCTGACCCTGATG ACAAACGAATTGGTGTTGTTTGGCATACCACTGGTTCTGGTAAATCATTGTCGATGGTCTTTTATTCTGGAATAGTAGCT CGTAAACTTGGTAATCCAACTATTTTAGTAATTAATGATCGTAATGATTTAGATGATCAGTTATTTGGTACTTTTGCGGC TGCTCATGAATATCTACAACAAAACCCTGATCACGCTGAATCACGAGGAGAAGTTCGTAAATATATGAGTAAGAATTCTG GCGGGATTGTTTTTAGTACAATTCAAAAATTCTCACCAAACTTTGACGCAGGTGAAGAACATATGCCTATACTTACAAAC CGTTCTAACGTTATCGTAATAGTTGATGAAGCTCATCGGTCTCAATATGGAATGCAGGCAAAACTAACCGATAATGGTAT TCGTTATGGATATGCTAAATATTTGCGTGAGGCTCTTCCTAACGCCTCGTTTATTGGTTTTACAGGAACACCAATAAATA CTGAAGATAAATCTACCGTGGCAATGTTTGGAAATTACATTGATGTTTATGATATTACTCAAGCCGTTAATGATCATGCC ACGGTCCGGATTTATTATGAAAGTCACGTTTTCCCATTAAAGCTTAAGGACAATGCAATTGATGAATATCAAAAGTTAAT TAAAGAAGCTGGTATCAATGACGATCCTAATCTTAGGGAAACTGAGCGACGAAATCGGGCATTTACTAGATTAGAGGCCC TTGCCGGTGCAAAACCACGGTTAGAAAAAATAGCCCAACACTTTGTTCATCATTTTGAATCACGACAAAAGGAAGAATTT GGTAAGTCGATGATTGTTGAAATGTCACGACAAAATGCAGTAAAGCTATATAATGAAATTGCAAAATTACGTCCTGAGTG GATAAATGATGATATTCATAAGGGAAAAATCAAAGTTATTATGACGTCTAATGCTTCTGATGGCCCAGAATTTGCTAAAT TTAAGACAAGCAAACAAGACCGATTTACGTTACAACAACGGATGAAAGATAACGATGACGAATTACAAATTGTAATAGTT GTTGATATGTGGCTAACTGGATTTGATGTTCCTAGCATGAATACCATGTACATTGACAAGCCAATGCAAGGACATAATCT TATCCAAGCAATTGCTCGTGTTAATCGGGTGTTTAAGAATAAAGATAGTGGGCTAATTGTCGATTATATTGGGATTGCTG ATGCCCTTCGTTTTGCCTTAAATGTATATACAAAAGATGACCAAGGAAAAGTTGGAATTAATGTTGATCGTGCACTAATG CTTCTAAAAGAGAAATATGACATTATTAAAGAAGATTTCCTATATGGGATTGATTACTCAGAATTTGATTCTGATGATAG CCAAACTCGTCAGAAGGCAGTTACTCGTGTTGTAAATGAATTAGCTGCAGAGGACGATGAAACAAAACAAAAATTCTTTG ATGTAGTAACAGAACTTCAAAAAGCTTATGCATTAGTTTCAACACAGCCTGAGGCCCAAGATTTAAGTGCGGAGATAGCA TTCTTTAAAACGGTTAAAGTATTCTTAACTAAGCTTGAGGCTCCTGACGATCCAGATGATAGTAAAGAGATTCATAGTTC TGTCGATTATCGAATGCAACAGCTATTAGATCAATCAATTATTTCAGAGCCGAATGTTGATATTTATCGTGACCTAGGAT TAGAACGCCCTAACTTAGATTTAATCTCAGAACAATTTCTTGAAAAAGTAAATGAAATTACTGAGAAAGATCTAGCAATT ACTCTTTTAGAGAAACTATTAAAAGGGCAAGTAAAAGCCTACCAAAAAACGAATATTGTTAAAGGCAAGAAGTTTGAGGA ATTACTTCAAGAGTCAATTGATGATTACAATAAGCGGGGAATTACCAGTGAAATTGTAATTAGAAAGTTAATTGATATGG CTAAGGAAATTAATAAAGAACAACAAGAAGGTAAGAATCTGGGACTTTCAAAAGAAGAAGTTGCCTTTTATGATGCTTTA GCTGATCACGAGAAAGCTGTTCAAGAATTAGGAGAAGAAAAGTTACATCTCATCGCTGCTGAATTAGTAAAGACTGTAAA GCAACAATCAGGGGTTGATTGGGAGCGGCGCAGCAATGTTCGTGCTAAAATGCGTGTCGCAGTTAAACATCTATTACGTA AGTACGGTTATCCACCTGATATTGCTCCAGATGCAATTAAGACCGTAGTAAAGCAAGCTGAACAAATGGCCTCTCAAGAG AGCTGA Protein sequence : MASYLNEENIEGIALRCLDEVGYQVYKSASYTSPNVEIDAERNNDHTQPILKGQLENALRKLNPGLDDEVYRNAIHQFEM LADSPDMMLNNHKLHELIIGGAKVKTSIKGEDRTITLYPIDFKNVDSNTFVATNQFTMKQGEHERRPDITLFINGLPLVT FELKNPANANVGIQQAFAQFSTYKEEISSYMQYNEILIVSDGINARAGSLTAGIDRFMRWREPKNVDIDDSMMELEVLIK YMLTPSDLLNIIQNFILFESDGDKTIKILAAYHQYYMVNKAVKRTSKVLADPDDKRIGVVWHTTGSGKSLSMVFYSGIVA RKLGNPTILVINDRNDLDDQLFGTFAAAHEYLQQNPDHAESRGEVRKYMSKNSGGIVFSTIQKFSPNFDAGEEHMPILTN RSNVIVIVDEAHRSQYGMQAKLTDNGIRYGYAKYLREALPNASFIGFTGTPINTEDKSTVAMFGNYIDVYDITQAVNDHA TVRIYYESHVFPLKLKDNAIDEYQKLIKEAGINDDPNLRETERRNRAFTRLEALAGAKPRLEKIAQHFVHHFESRQKEEF GKSMIVEMSRQNAVKLYNEIAKLRPEWINDDIHKGKIKVIMTSNASDGPEFAKFKTSKQDRFTLQQRMKDNDDELQIVIV VDMWLTGFDVPSMNTMYIDKPMQGHNLIQAIARVNRVFKNKDSGLIVDYIGIADALRFALNVYTKDDQGKVGINVDRALM LLKEKYDIIKEDFLYGIDYSEFDSDDSQTRQKAVTRVVNELAAEDDETKQKFFDVVTELQKAYALVSTQPEAQDLSAEIA FFKTVKVFLTKLEAPDDPDDSKEIHSSVDYRMQQLLDQSIISEPNVDIYRDLGLERPNLDLISEQFLEKVNEITEKDLAI TLLEKLLKGQVKAYQKTNIVKGKKFEELLQESIDDYNKRGITSEIVIRKLIDMAKEINKEQQEGKNLGLSKEEVAFYDAL ADHEKAVQELGEEKLHLIAAELVKTVKQQSGVDWERRSNVRAKMRVAVKHLLRKYGYPPDIAPDAIKTVVKQAEQMASQE S |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 49 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 49 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 49 |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 44 |
