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Name : LRI_0102 (LRI_0102) Accession : YP_008098456.1 Strain : Lactobacillus reuteri I5007 Genome accession: NC_021494 Putative virulence/resistance : Unknown Product : transposase IS4 family protein Function : - COG functional category : - COG ID : - EC number : - Position : 115757 - 116986 bp Length : 1230 bp Strand : + Note : COG: COG3666 DNA sequence : ATGTATCAAAATTATATCACAGGGCAAACAGAATTCGTACTAAATTATGATTATAATGTTCCATCAAGACATATTGTGCG TATGATTGATGCTTTTGTAGATTCGATTCCACAAGAAGTCTTATTTGATGACAAAGTAGCGACTACCGGTCGCCCACTTT CTCATCCAGCGATTATGCTTAAAATTCTATTATTTGCCTACTCACGTCAAACTTATTCTGGTCGGAAAATTGAGTTGATG CTTGAAGAGAATTTACCAATGCGTTGGTTGGCACGTGATCATACCTACAGTTACCATACAATTAATAATTTTCGCCAAAG TCAACACGCTAATAATTTAATCAAACGTTCTTTTGTGTATTTTACGATGGCATTAAAGGATCACGGACTAATTCAAAGTG ATGCTTTCTTTATTGATGGGACAAAGCTTGAGGCAGATGCCAATAAGTATTCGTTTACTTGGCGTCGAGCTGTTGAAAAA TATCATGCAAAATTAAAAGAAAAAACAATTAAACTTTACGAAGATTTAGTCGAAAAACGGGTAGTTAAAGCGATGAGTCC AGAACTAGTGGAAACCGCTAATGGAATGGCTCTTATGGCTGAAAATATTGATGATAAAATCAGTGAATTGAATGAAGAAA TAGCTCAAGAGCCTAAAGTAATCAAGGGTGGTTCAGTTAAGAAACGACGACGCCGTTTCTTAAAAAAGATTCGTCGACAA TTAAAAGAAGACTTTATACCTCGTGCTAATAAGTATGAAAAAGCAGAAGATATTTTTAAGGGCCGCAATAGCTTTTCAAA AACAGATCATGATGCCACATTCATGTGTATGAAAGAAGATCCAATGAAAAACCGAGAATTGAAACCTGGATACAACTTAC AAATCGCTACCCACAATCAATTTGTTCTTGATTATGCCTTGTATTCTAATCCGACAGATACTAGAACATTAGTACCATTT CTTGCTCAATTTCATTCTTTAGATTTCTTTGATCATATCGTGGCTGATGCAGGGTATGGTAGTGAATATAATTACACGAC AATTATTGATCAGTTTGAAAAACAGCCTGTTATTCCATATACGACTTACCAAAAGGAACAGAAACGAAAATACAAGACTG ATCCAACTAAATCACAAAACTGGCAATATAATGCCGAAGATGATTATTACATTGACCATCTAGGAGTTCGTTTTAGTTTT TATCGTTACAGTCGAAGAATTGATAAATAG Protein sequence : MYQNYITGQTEFVLNYDYNVPSRHIVRMIDAFVDSIPQEVLFDDKVATTGRPLSHPAIMLKILLFAYSRQTYSGRKIELM LEENLPMRWLARDHTYSYHTINNFRQSQHANNLIKRSFVYFTMALKDHGLIQSDAFFIDGTKLEADANKYSFTWRRAVEK YHAKLKEKTIKLYEDLVEKRVVKAMSPELVETANGMALMAENIDDKISELNEEIAQEPKVIKGGSVKKRRRRFLKKIRRQ LKEDFIPRANKYEKAEDIFKGRNSFSKTDHDATFMCMKEDPMKNRELKPGYNLQIATHNQFVLDYALYSNPTDTRTLVPF LAQFHSLDFFDHIVADAGYGSEYNYTTIIDQFEKQPVIPYTTYQKEQKRKYKTDPTKSQNWQYNAEDDYYIDHLGVRFSF YRYSRRIDK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | BAC67565.1 | hypothetical protein | Not tested | Type-IVc SCCmec | Protein | 3e-67 | 43 |
| SACOL0036 | YP_184947.1 | IS1272 transposase | Not tested | Type-I SCCmec | Protein | 1e-66 | 43 |
| SAMSHR1132_00350 | YP_005324559.1 | putative transposase | Not tested | Type-IIIinv SCCmec | Protein | 1e-66 | 43 |
| MW0034 | NP_644849.1 | hypothetical protein | Not tested | Type-IV SCCmec | Protein | 1e-66 | 43 |
| unnamed | BAA86649.1 | hypothetical protein | Not tested | Type-I SCCmec | Protein | 8e-67 | 43 |
| SAUSA300_0034 | YP_492755.1 | IS1272, transposase | Not tested | Type-IV SCCmec | Protein | 1e-64 | 42 |
