Gene Information

Name : H650_00335 (H650_00335)
Accession : YP_008098284.1
Strain :
Genome accession: NC_021492
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 51940 - 54924 bp
Length : 2985 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGCCACGGCGACAGATACTGAGCAGTGAAGAGCAGGAACGCTTACTGGTTATACCAGATGATGAAATTATTCTGACCCG
AATGTGTTTTCTGAACGAACCGGATATTGCGCTCATTAATAAGCACCGACGGCCAGCGAATCGCCTGGGCTTTGCTGTAT
TACTCTGTTATCTGCGTGGACCCGGATTTATTCCGGACAAAAGCAGTGCTCCTCACAATGGCGTTGTAACCAGGGTTGCT
TCCCGACTGAAACTTCAGCCTGATTTATGGCCGGAATATGCATCCAGAGAGCAAACCCGCTGGGAACATCTGACCGAACT
TTATCGCTACCTGGAAATATCCCCGTTCAGCCGGTCAATGCAAAAAGACTGTATCCGTCATCTGCACCCCGATGCCATGC
GAACTGACAAAGGATTTATGCTGGCGGAAGAAATGCTCAGCTGGCTACATAACAATAATGTTATTTTCCCTTCTGTTGAA
GTGATCGAACGGACGCTTGCCGAAGTCGTCACGCTCGCTAACAGATCGGTATTTTCGACACTTACCGCGCAACTGGAAAA
GCAGCATAAATCAGCACTCGACAGCCTGCTCATATCAGAGGGTGAACAACCTTCCCGTCTGGCATGGCTGCTACAGCCTC
CGGGTAAAATAAACGGTAAAAATGTGCTGCAACATATCGACCGGCTTAATTCCATCGCTGCGCTGGGGTTGCCTGATGGT
ATTGCGCTTTCCGTTCACCAGAACAGGTTGCTTAAACTGGCGCGTGAGGGCCGGAAAATGAGCAGCAGGGACCTGGCAAA
ATTCACCGATGTCAGACGTTACGCTACGCTGGTTTGTATAATAATAGAGGCCAGGGCCACTCTGACTGACGAAGTGATTG
ATCTGCACGAGCGTATCTTGGGTAGTCTGTTCAGCAGGGCAAAACGCACGCAGGCCGAACGGCTCCAGCAAACGGGAAAG
CTTATTCAGAGCAAGCTGAAGCAGTACGTTACCGTCGGGCAGGCGTTACTTAACGCCAGAGAATCCGGGGAAGATCCCTG
GACTGCAATAGAAGATGTCCTTCCCTGGCAGGAATTCATCAACAGCGTGGAAGAAACGCGGTTTCTGTCCCGTAAGGGCA
ATTTCGACCCGCTTCACCTGATCACCGAAAAATACAGTACGCTGCGTAAATACGCCCCGCGTATGCTGTCAGCATTGCAG
TTCATGGCGACACCTGCGGCGCAGACGCTCAGCGATGCGCTGGACACCATCAGGGAAATGTACCGTAAACAACTTCGTAA
AGTGCCGCTATCGGCGCCAACAGGATTTATCCCTGAAAGCTGGCGAAAACTGGTACTCACGCCTTCAGGAATCGACCGCA
AGTACTACGAGTTTTGCGTAATGAATGAACTCAAGGGGGCGCTACGTTCCGGTGATATCTGGGTAAAAGGATCGCGCCGC
TACAGAAATTTTGATGATTATCTCATCCCGACTGCTGAGTTTGAGAAATCCCGCCACAATGACCAGTTACAGTTGGCCGT
TCAGACCGATTGCCAGGCATATCTTCAGGCCCGTATGACGCTTCTTGCATCGCGTCTGGAAGAAGTTAACGCGATGGCGC
TTGCCGGTGATTTGCCCGATGTTGATATTTCAGATAAAGGAGTAAAAATCACTCCGCTGGAGAACAGCGTCCCTTCGGGT
GTTTCGCCCTTTGCCGATTTGGTTTATGGCATGCTTCCTCATCCGAAAATTACAGAGATACTGGAAGAAGTGGACAGCTG
GACGGGGTTTACGCGTCACTTCGCGCACCTCAAAAATAATAACGTCAGACCAAAAGACGGAAGACTGTTGCTGACCACCA
TTCTGGCCGACGGCATCAATCTGGGGCTGACAAAAATGGCGGAGTCCTGCCCGGGGGCAACAAAATCGTCACTCGAAGGT
ATTCAGGCATGGTACATCAGAGATGAAACTTATTCAGCGGCACTGGCCGAGCTGGTCAACGCTCAGAAAGCGCGGCCTCT
GGCCGCATTCTGGGGCGACGGGACAACATCATCGTCAGACGGGCAGAACTTTCGGGTAGGCAGTCACGGACGTTATGCCG
GTCAGGTCAATCTTAAATATGGTCAGGAGCCGGGCGTGCAGATTTATACGCATATCTCAGACCAATACAGCCCGTTCTAT
GCCAAAGTGATCAGCCGGGTGCGCGACTCAACCCACGTGCTTGATGGCCTGCTGTACCATGAAAGCGATCTGGAAATTAC
CGAGCATTACACCGATACCGCAGGCTTCACTGAACATGTTTTCGCCCTGATGCACCTGCTGGGATTCGCTTTTGCGCCGA
GGATCCGGGATCTTCATGACAAGCGGCTGTTTATTCATGGAAAGGCCGAACGCTATCCGGGGCTTCAGTCCGTCATATCA
ACAACCAGCCTGAATATCAAAGACATTGAGGCACACTGGGATGAGGTATTGCGCCTGGCAACCTCGATTAAGCAGGGGAC
AGTCACCGCATCGCTGATGATGAAAAAGTTAGCCAGTTACCCAAAACAGAATGGACTTGCCAAAGCGCTGAGAGAGATTG
GCCGCATTGAGCGGACACTATTTATGCTGGACTGGTTCCGTGATCCCGGTCTGCGCCGACGCGTACAGGCGGGGCTGAAT
AAGGGTGAGGCCCGTAATGCCCTTGCGCGAGCGGTCTTTATGCACCGTCTGGGTGAAATAAGGGATCGTGGGCTGGAGAA
TCAGAGTTACCGCGCCAGCGGGCTGACGTTACTGACAGCGGCGATCACGTTGTGGAACACGGTATATATAGAAAGAGCTA
TTGAGTCACTAAAACGAAAAGGTATCCCGATAAATGAGCAACTGGTATCTCATCTTTCTCCCCTGGGCTGGGAACATATC
AATCTGAGTGGAGATTACGTCTGGCGTAATAATTTTAAGCTGGGATCCGGAAAATACCGCTCATTACGCACAGTCGACAC
CACATTGTACAAAAAACAGTCTTAG

Protein sequence :
MPRRQILSSEEQERLLVIPDDEIILTRMCFLNEPDIALINKHRRPANRLGFAVLLCYLRGPGFIPDKSSAPHNGVVTRVA
SRLKLQPDLWPEYASREQTRWEHLTELYRYLEISPFSRSMQKDCIRHLHPDAMRTDKGFMLAEEMLSWLHNNNVIFPSVE
VIERTLAEVVTLANRSVFSTLTAQLEKQHKSALDSLLISEGEQPSRLAWLLQPPGKINGKNVLQHIDRLNSIAALGLPDG
IALSVHQNRLLKLAREGRKMSSRDLAKFTDVRRYATLVCIIIEARATLTDEVIDLHERILGSLFSRAKRTQAERLQQTGK
LIQSKLKQYVTVGQALLNARESGEDPWTAIEDVLPWQEFINSVEETRFLSRKGNFDPLHLITEKYSTLRKYAPRMLSALQ
FMATPAAQTLSDALDTIREMYRKQLRKVPLSAPTGFIPESWRKLVLTPSGIDRKYYEFCVMNELKGALRSGDIWVKGSRR
YRNFDDYLIPTAEFEKSRHNDQLQLAVQTDCQAYLQARMTLLASRLEEVNAMALAGDLPDVDISDKGVKITPLENSVPSG
VSPFADLVYGMLPHPKITEILEEVDSWTGFTRHFAHLKNNNVRPKDGRLLLTTILADGINLGLTKMAESCPGATKSSLEG
IQAWYIRDETYSAALAELVNAQKARPLAAFWGDGTTSSSDGQNFRVGSHGRYAGQVNLKYGQEPGVQIYTHISDQYSPFY
AKVISRVRDSTHVLDGLLYHESDLEITEHYTDTAGFTEHVFALMHLLGFAFAPRIRDLHDKRLFIHGKAERYPGLQSVIS
TTSLNIKDIEAHWDEVLRLATSIKQGTVTASLMMKKLASYPKQNGLAKALREIGRIERTLFMLDWFRDPGLRRRVQAGLN
KGEARNALARAVFMHRLGEIRDRGLENQSYRASGLTLLTAAITLWNTVYIERAIESLKRKGIPINEQLVSHLSPLGWEHI
NLSGDYVWRNNFKLGSGKYRSLRTVDTTLYKKQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EC042_4089 YP_006098372.1 transposase Not tested Tn2411 Protein 0.0 57
tnpA ACF06153.1 transposase Not tested Tn5036-like Protein 0.0 57
tnpA AAL08440.1 transposase TnpA Not tested SRL Protein 0.0 55
EXA24 ABD94633.1 truncated Tn1721 tranposase Not tested ExoU island A Protein 0.0 54
tnpA ACY75538.1 TnpA Not tested Tn6060 Protein 0.0 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H650_00335 YP_008098284.1 transposase VFG1031 Protein 0.0 55